RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 TMEM169Q96HH4 297 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 MSLNLQ96KJ4 702 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 MFSD14AQ96MC6 490 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 NLRP4Q96MN2 994 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 CCDC43Q96MW1 224 aaKnown RBP10.71□□□□□ -0.69
CLN6-203ENST00000563917 CASD1Q96PB1 797 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 KIAA1671Q9BY89 1806 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 CWH43Q9H720 699 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 STK36Q9NRP7 1315 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 BARX2Q9UMQ3 279 aaPredicted RBP10.71□□□□□ -0.69
CLN6-203ENST00000563917 KCNJ14Q9UNX9 436 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 PIN4Q9Y237 131 aaKnown RBP10.71□□□□□ -0.69
CLN6-203ENST00000563917 PPME1Q9Y570 386 aa10.71□□□□□ -0.69
CLN6-203ENST00000563917 XIRP2A4UGR9 3374 aa10.71□□□□□ -0.7
CLN6-203ENST00000563917 FNDC1Q4ZHG4 1894 aaPredicted RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 A0A087WZ62 844 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 TBX3O15119 743 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 MAFO75444 373 aaPredicted RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 P4HBP07237 508 aaKnown RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 FGFR4P22455 802 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 RAB27AP51159 221 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 ANAPC15P60006 121 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 ERVFC1P60507 584 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 RNASELQ05823 741 aaKnown RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 SCRN1Q12765 414 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 PPP2R5CQ13362 524 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 TRIM29Q14134 588 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 SMC1AQ14683 1233 aaKnown RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 TARBP2Q15633 366 aaKnown RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 CES5AQ6NT32 575 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 PIK3AP1Q6ZUJ8 805 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 RNF135Q8IUD6 432 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 ETNPPLQ8TBG4 499 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 URGCPQ8TCY9 931 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 CEP170P1Q96L14 293 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 AIFM3Q96NN9 605 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 FDXACB1Q9BRP7 624 aaPredicted RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 PHF20Q9BVI0 1012 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 PHF7Q9BWX1 381 aaPredicted RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 C11orf16Q9NQ32 467 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 ORC3Q9UBD5 711 aaPredicted RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 USP15Q9Y4E8 981 aaPredicted RBP10.7□□□□□ -0.7
CLN6-203ENST00000563917 PCDHGC5Q9Y5F6 944 aa10.7□□□□□ -0.7
CLN6-203ENST00000563917 IGKV6-21A0A0C4DH24 114 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 M0R2N6 131 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 GAS2O43903 313 aaKnown RBP10.69□□□□□ -0.7
CLN6-203ENST00000563917 PFKFB2O60825 505 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 CSDE1O75534 798 aaKnown RBP10.69□□□□□ -0.7
CLN6-203ENST00000563917 HOXB8P17481 243 aaPredicted RBP10.69□□□□□ -0.7
CLN6-203ENST00000563917 ATF7P17544 494 aaPredicted RBP10.69□□□□□ -0.7
CLN6-203ENST00000563917 KRT2P35908 639 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 RFC5P40937 340 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 TECP42680 631 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 PHKA2P46019 1235 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 HERC4Q5GLZ8 1057 aaPredicted RBP10.69□□□□□ -0.7
CLN6-203ENST00000563917 NCAPH2Q6IBW4 605 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 LLGL2Q6P1M3 1020 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 ZBTB33Q86T24 672 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 TCP11Q8WWU5 503 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 PSPC1Q8WXF1 523 aaKnown RBP10.69□□□□□ -0.7
CLN6-203ENST00000563917 CASP10Q92851 521 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 RPGRIP1Q96KN7 1286 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 SH2D3AQ9BRG2 576 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 CYP26B1Q9NR63 512 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 CLEC1BQ9P126 229 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 HCSTQ9UBK5 93 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 STK39Q9UEW8 545 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 MUTYHQ9UIF7 546 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 COL4A3BPQ9Y5P4 624 aa10.69□□□□□ -0.7
CLN6-203ENST00000563917 MUC3AQ02505 3323 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 PLXNA4Q9HCM2 1894 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 TMEM150BA6NC51 233 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 SPDYE4A6NLX3 237 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 FSCN2O14926 492 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 ASAP2O43150 1006 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 SLC37A4O43826 429 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 EDIL3O43854 480 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 ZC3H11AO75152 810 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLN6-203ENST00000563917 GLP2RO95838 553 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 BCAR1P56945 870 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 DRP2Q13474 957 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 GIT2Q14161 759 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 EPHA7Q15375 998 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 CLLU1OSQ5K130 101 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 PLA2G4FQ68DD2 849 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 B3GNT9Q6UX72 402 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 LRRC55Q6ZSA7 311 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 ANO5Q75V66 913 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 SRGAP1Q7Z6B7 1085 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 EDAQ92838 391 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 FAM193BQ96PV7 902 aaPredicted RBP10.68□□□□□ -0.7
CLN6-203ENST00000563917 LXNQ9BS40 222 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 TRAIPQ9BWF2 469 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 KCNH6Q9H252 994 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 ZSWIM4Q9H7M6 989 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 KCNMB3Q9NPA1 279 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 FAM105AQ9NUU6 356 aa10.68□□□□□ -0.7
CLN6-203ENST00000563917 PPP4R2Q9NY27 417 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms