RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ADCY2Q08462 1091 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 ADCY1Q08828 1119 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 LSM12Q3MHD2 195 aaKnown RBP4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 CNNM4Q6P4Q7 775 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 UNQ6494/PRO21346Q6UXR6 183 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 GAREM2Q75VX8 874 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 KANSL1Q7Z3B3 1105 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 LRRTM3Q86VH5 581 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 CACTINQ8WUQ7 758 aaKnown RBP4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 CHTF18Q8WVB6 975 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 APPBP2Q92624 585 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 PLEKHG4BQ96PX9 1271 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 MPHOSPH9Q99550 1183 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 MRIQ9BWK5 157 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 PITHD1Q9GZP4 211 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 MTFR1LQ9H019 292 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 MTG2Q9H4K7 406 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 THG1LQ9NWX6 298 aaKnown RBP4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 GIT1Q9Y2X7 761 aa4.91□□□□□ -1.62
HMGB1P33-201ENST00000563485 A0A0A6YYJ9 748 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 UBE2QL1A1L167 161 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 GOLGA8BA8MQT2 603 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 GAS7O60861 476 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 TOX4O94842 621 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 PCBP1Q15365 356 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 KIAA1841Q6NSI8 718 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 TIGD7Q6NT04 549 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 C16orf86Q6ZW13 317 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 KIF18BQ86Y91 864 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 PLA2G15Q8NCC3 412 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 NINJ1Q92982 152 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 IFT57Q9NWB7 429 aa4.9□□□□□ -1.63
HMGB1P33-201ENST00000563485 A0A0A6YYK5 440 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 TGM5O43548 720 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 NARSO43776 548 aaKnown RBP4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 OPHN1O60890 802 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 VSIG10L2P0DP72 767 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 POU3F2P20265 443 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 CD40P25942 277 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 CRHR2Q13324 411 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 RRP1BQ14684 758 aaKnown RBP4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 GAGE13Q4V321 117 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 KRT40Q6A162 431 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 Q6ZRM9 215 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 JAZF1Q86VZ6 243 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 DHX37Q8IY37 1157 aaKnown RBP4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 NIM1KQ8IY84 436 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 ZZZ3Q8IYH5 903 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 EFHBQ8N7U6 833 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 SOX7Q9BT81 388 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 IL23AQ9NPF7 189 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 CEP72Q9P209 647 aa4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 MRPL42Q9Y6G3 142 aaKnown RBP4.89□□□□□ -1.63
HMGB1P33-201ENST00000563485 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 ELL2O00472 640 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 CYP27B1O15528 508 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 CDC45O75419 566 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 SMAD3P84022 425 aaKnown RBP4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 ABHD18Q0P651 414 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 ELAVL1Q15717 326 aaKnown RBP4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 SEPT7Q16181 437 aaKnown RBP4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 FNDC7Q5VTL7 733 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 FAM111BQ6SJ93 734 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 TMPRSS6Q8IU80 811 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 THEMISQ8N1K5 641 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 ANKRD35Q8N283 1001 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 TCF25Q9BQ70 676 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 NOL10Q9BSC4 688 aaKnown RBP4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 TARS2Q9BW92 718 aaKnown RBP4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 AURKAIP1Q9NWT8 199 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 RCAN3Q9UKA8 241 aa4.88□□□□□ -1.63
HMGB1P33-201ENST00000563485 LCHNA4D1U4 455 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 DAPK3O43293 454 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 PCDH8O95206 1070 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 SCNN1GP51170 649 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 KPNA1P52294 538 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 TUBA3CQ13748 450 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 FHL2Q14192 279 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 LRRC32Q14392 662 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 ZBTB41Q5SVQ8 909 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 TUBA3EQ6PEY2 450 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 SMC1BQ8NDV3 1235 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 MIEF2Q96C03 454 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 GPR101Q96P66 508 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 MS4A5Q9H3V2 200 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 ZNF703Q9H7S9 590 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 C14orf93Q9H972 538 aaKnown RBP4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 NCDNQ9UBB6 729 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 MSRAQ9UJ68 235 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 SYNPO2Q9UMS6 1093 aa4.87□□□□□ -1.63
HMGB1P33-201ENST00000563485 MAFGO15525 162 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 SUV39H1O43463 412 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 JUNP05412 331 aaKnown RBP4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 MCM7P33993 719 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 KIR2DL3P43628 341 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 DALRD3Q5D0E6 543 aaKnown RBP4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 FKBP15Q5T1M5 1219 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 PASD1Q8IV76 773 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 PPM1KQ8N3J5 372 aa4.86□□□□□ -1.63
HMGB1P33-201ENST00000563485 ZNF496Q96IT1 587 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms