RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 PCDHA2Q9Y5H9 948 aa10.69□□□□□ -0.7
UBFD1-202ENST00000563366 MGAMO43451 1857 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 SYNGAP1Q96PV0 1343 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 IGKV6D-21A0A0A0MT36 114 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 NPHP3-ACAD11A0A0J9YXS1 232 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 NOP56O00567 594 aaKnown RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 PEX10O60683 326 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 FARP2O94887 1054 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 GCNT3O95395 438 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 GGPS1O95749 300 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 ALDH1A1P00352 501 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 SFPQP23246 707 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 DNM2P50570 870 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 COPB1P53618 953 aaKnown RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 SMTNP53814 917 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 RTP1P59025 263 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 PRKCEQ02156 737 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 PPP2R3AQ06190 1150 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 NR1I3Q14994 352 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 KRT31Q15323 416 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 KNOP1Q1ED39 458 aaKnown RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 ZNF792Q3KQV3 632 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 HSP90AA4PQ58FG1 418 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 MAMDC4Q6UXC1 1216 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 EPM2AIP1Q7L775 607 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 GPR142Q7Z601 462 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 FILIP1Q7Z7B0 1213 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 DPP9Q86TI2 863 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 ZNF507Q8TCN5 953 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 AFAP1L1Q8TED9 768 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 SCFD1Q8WVM8 642 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 SEPT1Q8WYJ6 367 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 BAP1Q92560 729 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 HPS3Q969F9 1004 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 HVCN1Q96D96 273 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 CNOT6LQ96LI5 555 aaKnown RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 PTPN18Q99952 460 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 DUSP9Q99956 384 aaKnown RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 SEMA6BQ9H3T3 888 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 AZI2Q9H6S1 392 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 ZFYVE28Q9HCC9 887 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 TYW1Q9NV66 732 aaKnown RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 DDX41Q9UJV9 622 aaKnown RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 TRAF3IP3Q9Y228 551 aa10.68□□□□□ -0.7
UBFD1-202ENST00000563366 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-202ENST00000563366 EMSYQ7Z589 1322 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 ADGRA2Q96PE1 1338 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 A0A1W2PQC6 194 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 LGALS16A8MUM7 142 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 RNF223E7ERA6 249 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 CETN3O15182 167 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 ZBTB24O43167 697 aaPredicted RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 USO1O60763 962 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 HIP1RO75146 1068 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 PLS3P13797 630 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 MTIF2P46199 727 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 PMS1P54277 932 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 MARSP56192 900 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 SNRPFP62306 86 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 HSP90AA2PQ14568 343 aaPredicted RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 AGERQ15109 404 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 NFIL3Q16649 462 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 UGCGQ16739 394 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 LINC01559Q495D7 138 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 CELF3Q5SZQ8 465 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 FKBP15Q5T1M5 1219 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 ANO5Q75V66 913 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 ARMCX2Q7L311 632 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 HS2ST1Q7LGA3 356 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 APTXQ7Z2E3 356 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 ZBTB33Q86T24 672 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 CCDC60Q8IWA6 550 aaPredicted RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 DHX37Q8IY37 1157 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 CEP170P1Q96L14 293 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 FGD4Q96M96 766 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 NAP1L5Q96NT1 182 aaPredicted RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 TUBGCP2Q9BSJ2 902 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 KCTD10Q9H3F6 313 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 ST6GALNAC4Q9H4F1 302 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 NRBP2Q9NSY0 501 aa10.67□□□□□ -0.7
UBFD1-202ENST00000563366 ABT1Q9ULW3 272 aaKnown RBP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.67□□□□□ -0.7
UBFD1-202ENST00000563366 RSPH10B2B2RC85 870 aa10.66□□□□□ -0.7
UBFD1-202ENST00000563366 IGF2BP3O00425 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
UBFD1-202ENST00000563366 NKRFO15226 690 aaKnown RBP eCLIP10.66□□□□□ -0.7
UBFD1-202ENST00000563366 SLC16A3O15427 465 aaKnown RBP10.66□□□□□ -0.7
UBFD1-202ENST00000563366 TLR2O60603 784 aa10.66□□□□□ -0.7
UBFD1-202ENST00000563366 TOMM70O94826 608 aa10.66□□□□□ -0.7
UBFD1-202ENST00000563366 RSPH10BP0C881 870 aa10.66□□□□□ -0.7
UBFD1-202ENST00000563366 TXNP10599 105 aaKnown RBP10.66□□□□□ -0.7
UBFD1-202ENST00000563366 PTGS1P23219 599 aa10.66□□□□□ -0.7
UBFD1-202ENST00000563366 TCF7P36402 384 aaPredicted RBP10.66□□□□□ -0.7
UBFD1-202ENST00000563366 SP2Q02086 613 aa10.66□□□□□ -0.7
UBFD1-202ENST00000563366 SP4Q02446 784 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms