RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 GLT1D1Q96MS3 346 aa16.3■□□□□ 0.2
CDH11-207ENST00000563255 NTPCRQ9BSD7 190 aaKnown RBP16.3■□□□□ 0.2
CDH11-207ENST00000563255 SEZ6LQ9BYH1 1024 aa16.3■□□□□ 0.2
CDH11-207ENST00000563255 ZHX3Q9H4I2 956 aa16.3■□□□□ 0.2
CDH11-207ENST00000563255 SETD4Q9NVD3 440 aa16.3■□□□□ 0.2
CDH11-207ENST00000563255 HDAC6Q9UBN7 1215 aa16.3■□□□□ 0.2
CDH11-207ENST00000563255 C17orf102A2RUQ5 167 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 SFI1A8K8P3 1242 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 ASAP2O43150 1006 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 CAVIN2O95810 425 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 TMOD1P28289 359 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 DNM2P50570 870 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 IGBP1P78318 339 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 STK4Q13043 487 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 SHHQ15465 462 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 ODR4Q5SWX8 454 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
CDH11-207ENST00000563255 LMBR1Q8WVP7 490 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 SPIRE2Q8WWL2 714 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 BADQ92934 168 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 GUCD1Q96NT3 240 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 SUGCTQ9HAC7 445 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 POLD4Q9HCU8 107 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 GPRC5CQ9NQ84 441 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 GTF2IRD1Q9UHL9 959 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
CDH11-207ENST00000563255 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 CHMP4BP1P59074 171 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
CDH11-207ENST00000563255 ITGA7Q13683 1181 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 MXD4Q14582 209 aaPredicted RBP16.28■□□□□ 0.2
CDH11-207ENST00000563255 PPP2R5AQ15172 486 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 DPCR1Q3MIW9 517 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 FAM178BQ8IXR5 827 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 KIAA0895Q8NCT3 520 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 KCNN1Q92952 543 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 TMEM143Q96AN5 459 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 IFT74Q96LB3 600 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 FIZ1Q96SL8 496 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 POLR3FQ9H1D9 316 aaPredicted RBP16.28■□□□□ 0.2
CDH11-207ENST00000563255 TSPY26PQ9H489 355 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 ST6GALNAC4Q9H4F1 302 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
CDH11-207ENST00000563255 GRIN2DO15399 1336 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 PRUNE2Q8WUY3 3088 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 A0A1W2PQ45 241 aaPredicted RBP16.27■□□□□ 0.2
CDH11-207ENST00000563255 A0A1W2PQY0 241 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 H0YCG3 227 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 SCP2P22307 547 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 GLRA2P23416 452 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 ABCD1P33897 745 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 SMTNP53814 917 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 NCKAP1LP55160 1127 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 PEX3P56589 373 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 TLE2Q04725 743 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 DMP1Q13316 513 aaPredicted RBP16.27■□□□□ 0.2
CDH11-207ENST00000563255 STIM1Q13586 685 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 HIC1Q14526 733 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 SNX17Q15036 470 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 ANO6Q4KMQ2 910 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 C9orf50Q5SZB4 431 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 ZNF697Q5TEC3 545 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 ADSSL1Q8N142 457 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 GUF1Q8N442 669 aaKnown RBP16.27■□□□□ 0.2
CDH11-207ENST00000563255 LRRC71Q8N4P6 559 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 METTL13Q8N6R0 699 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 SLC43A3Q8NBI5 491 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 PSPC1Q8WXF1 523 aaKnown RBP16.27■□□□□ 0.2
CDH11-207ENST00000563255 HPS3Q969F9 1004 aa16.27■□□□□ 0.2
CDH11-207ENST00000563255 MRPL44Q9H9J2 332 aaKnown RBP16.27■□□□□ 0.2
CDH11-207ENST00000563255 TRIM43BA6NCK2 446 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 PPP1R3GB7ZBB8 358 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 EIF3DO15371 548 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDH11-207ENST00000563255 KIF20AO95235 890 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 PRCPP42785 496 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 NAMPTP43490 491 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 NPTX2P47972 431 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 CDC42EP1Q00587 391 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 POU5F1BQ06416 359 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 DRP2Q13474 957 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 ALCAMQ13740 583 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 STXBP4Q6ZWJ1 553 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 EPM2AIP1Q7L775 607 aaPredicted RBP16.26■□□□□ 0.19
CDH11-207ENST00000563255 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 ASAP3Q8TDY4 903 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 PRPF31Q8WWY3 499 aaKnown RBP16.26■□□□□ 0.19
CDH11-207ENST00000563255 BSNDQ8WZ55 320 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 VTI1AQ96AJ9 217 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 TRIM43Q96BQ3 446 aaPredicted RBP16.26■□□□□ 0.19
CDH11-207ENST00000563255 BPIFA3Q9BQP9 254 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 NAT10Q9H0A0 1025 aaKnown RBP16.26■□□□□ 0.19
CDH11-207ENST00000563255 DNAJC25Q9H1X3 360 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 STARD7Q9NQZ5 370 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 TBC1D7Q9P0N9 293 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 SUCLA2Q9P2R7 463 aaPredicted RBP16.26■□□□□ 0.19
CDH11-207ENST00000563255 PCDHB13Q9Y5F0 798 aa16.26■□□□□ 0.19
CDH11-207ENST00000563255 UBE4BO95155 1302 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms