RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 LRSAM1Q6UWE0 723 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 GPR155Q7Z3F1 870 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 PALM2Q8IXS6 379 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 IFNL2Q8IZJ0 200 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 COG1Q8WTW3 980 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 TUBGCP5Q96RT8 1024 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 CARD11Q9BXL7 1154 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 SCAND2PQ9GZW5 306 aaPredicted RBP4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 OR10A5Q9H207 317 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 MS4A5Q9H3V2 200 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 HOMER2Q9NSB8 354 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 MSRAQ9UJ68 235 aa4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 NOC2LQ9Y3T9 749 aaKnown RBP4.44□□□□□ -1.7
SHCBP1-202ENST00000563219 ELL2O00472 640 aaPredicted RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 FOXS1O43638 330 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 KDM1AO60341 852 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 PRPF6O94906 941 aaKnown RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 ZNF888P0CJ79 500 aaPredicted RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 APEX1P27695 318 aaKnown RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 RGS3P49796 1198 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 ERVK-21P61565 698 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 TOP3AQ13472 1001 aaPredicted RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 HS1BP3Q53T59 392 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 KIAA1841Q6NSI8 718 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 TIGD7Q6NT04 549 aaPredicted RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 ESPNLQ6ZVH7 1005 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 TAX1BP1Q86VP1 789 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 CXorf67Q86X51 503 aaPredicted RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 CNTD1Q8N815 330 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 STAG1Q8WVM7 1258 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 NEIL1Q96FI4 390 aaPredicted RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 AHCYL2Q96HN2 611 aaKnown RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 LRRC37BQ96QE4 947 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 MYL10Q9BUA6 226 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 TRIM8Q9BZR9 551 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 PITHD1Q9GZP4 211 aaPredicted RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 WNT8AQ9H1J5 351 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 VPS11Q9H270 941 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 POFUT1Q9H488 388 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 VTA1Q9NP79 307 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 TOPORSQ9NS56 1045 aaPredicted RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 DDX56Q9NY93 547 aaKnown RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 FBXO10Q9UK96 956 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 ZFR2Q9UPR6 939 aaKnown RBP4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 PTPN22Q9Y2R2 807 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 WASHC2CQ9Y4E1 1318 aa4.43□□□□□ -1.7
SHCBP1-202ENST00000563219 LCHNA4D1U4 455 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 CYR61O00622 381 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 FZD7O75084 574 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 MANFP55145 182 aaKnown RBP4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 BCAR1P56945 870 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 CD83Q01151 205 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 EXOSC10Q01780 885 aaKnown RBP4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 ADCY2Q08462 1091 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 MTMR1Q13613 665 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 PDCD1Q15116 288 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 BRDTQ58F21 947 aaPredicted RBP4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 SPDYAQ5MJ70 313 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 PRAMEF9Q5VWM5 478 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 TMEM200BQ69YZ2 307 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 NOL8Q76FK4 1167 aaKnown RBP4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 GIMAP8Q8ND71 665 aaPredicted RBP4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 ACAP3Q96P50 834 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 ORAI2Q96SN7 254 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 DENND2AQ9ULE3 1009 aa4.42□□□□□ -1.7
SHCBP1-202ENST00000563219 KATNA1O75449 491 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 PFKMP08237 780 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 RAC3P60763 192 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 KLF1Q13351 362 aaPredicted RBP4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 NOLC1Q14978 699 aaKnown RBP eCLIP4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 PRKD1Q15139 912 aaPredicted RBP4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 FSCN1Q16658 493 aaKnown RBP4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 INAVAQ3KP66 663 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 PLEKHG6Q3KR16 790 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 ZBTB41Q5SVQ8 909 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 SYDE2Q5VT97 1194 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 GRAMD4Q6IC98 578 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 UNQ6494/PRO21346Q6UXR6 183 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 CBARPQ8N350 705 aaPredicted RBP4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 WDR48Q8TAF3 677 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 LMBR1Q8WVP7 490 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 RPGRQ92834 1020 aaKnown RBP4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 ASPSCR1Q9BZE9 553 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 HAPLN2Q9GZV7 340 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 C14orf119Q9NWQ9 140 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 KCMF1Q9P0J7 381 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 PPP2R3BQ9Y5P8 575 aa4.41□□□□□ -1.7
SHCBP1-202ENST00000563219 A0A0A6YYJ9 748 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 PRSS38A1L453 326 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 MAFGO15525 162 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 SLPIP03973 132 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 S100BP04271 92 aaPredicted RBP4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 PDGFRBP09619 1106 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 ETV4P43268 484 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 MAP3K12Q12852 859 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 WDR72Q3MJ13 1102 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 ZNF568Q3ZCX4 644 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 ZMAT1Q5H9K5 638 aa4.4□□□□□ -1.71
SHCBP1-202ENST00000563219 AGBL4Q5VU57 503 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms