RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 TBC1D1Q86TI0 1168 aaPredicted RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 LRRC47Q8N1G4 583 aaKnown RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 TTLQ8NG68 377 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 UCMAQ8WVF2 138 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 DNAJC1Q96KC8 554 aaKnown RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 SDHAF3Q9NRP4 125 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 CNTN3Q9P232 1028 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 DOLKQ9UPQ8 538 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 TNFRSF10BO14763 440 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 FARP2O94887 1054 aaPredicted RBP10.07□□□□□ -0.8
CDH1-205ENST00000562836 ZBTB11O95625 1053 aaPredicted RBP10.07□□□□□ -0.8
CDH1-205ENST00000562836 SFTPCP11686 197 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 PPP2R2BQ00005 443 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 ACY1Q03154 408 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 TTLL12Q14166 644 aaPredicted RBP10.07□□□□□ -0.8
CDH1-205ENST00000562836 NDUFAF5Q5TEU4 345 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 MAMDC2Q7Z304 686 aaPredicted RBP10.07□□□□□ -0.8
CDH1-205ENST00000562836 CCNYL1Q8N7R7 359 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 NAT8LQ8N9F0 302 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 STKLD1Q8NE28 680 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 SGK3Q96BR1 496 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 WNT8AQ9H1J5 351 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 DACH1Q9UI36 760 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 MACROD2A1Z1Q3 448 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 LRRIQ4A6NIV6 560 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 KRIT1O00522 736 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 APBB3O95704 486 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 RECKO95980 971 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 PRLP01236 227 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 RETP07949 1114 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 ATP6V1C1P21283 382 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 PSMC2P35998 433 aaKnown RBP10.07□□□□□ -0.8
CDH1-205ENST00000562836 ATP1A2P50993 1020 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 UBE2HP62256 183 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 GOLGA8FQ08AF8 430 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 C2orf54Q08AI8 447 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 GOLGA8DPQ0D2H9 430 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 TMEM266Q2M3C6 531 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 USP43Q70EL4 1123 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 TMC7Q7Z402 723 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 FERMT3Q86UX7 667 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 ANKRD53Q8N9V6 530 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 IPMKQ8NFU5 416 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 JPH3Q8WXH2 748 aaPredicted RBP10.07□□□□□ -0.8
CDH1-205ENST00000562836 RAPGEF5Q92565 580 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 PRCCQ92733 491 aaPredicted RBP10.07□□□□□ -0.8
CDH1-205ENST00000562836 DHX58Q96C10 678 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 FAM167AQ96KS9 214 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 GDAP1L1Q96MZ0 367 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 C19orf43Q9BQ61 176 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 EHD1Q9H4M9 534 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 POLD4Q9HCU8 107 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 ATP8A2Q9NTI2 1148 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 LRRC42Q9Y546 428 aa10.07□□□□□ -0.8
CDH1-205ENST00000562836 MSH6P52701 1360 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 CDC42BPAQ5VT25 1732 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 AGR2O95994 175 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 HSPA6P17066 643 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 IDUAP35475 653 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 EIF2B2P49770 351 aaKnown RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 SHEQ5VZ18 495 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 METTL2BQ6P1Q9 378 aaKnown RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 NLRP14Q86W24 1093 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 MYCBPAPQ8TBZ2 947 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 CMTM3Q96MX0 182 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 VPS35Q96QK1 796 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 MPHOSPH8Q99549 860 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 CRNKL1Q9BZJ0 848 aaKnown RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 DCTPP1Q9H773 170 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 FAM114A2Q9NRY5 505 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 PCOLCE2Q9UKZ9 415 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 ATP6V1DQ9Y5K8 247 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 PRDM15P57071 1507 aaPredicted RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 A6NNZ2 444 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 TMEM114B3SHH9 223 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 E9PMD0 336 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 GOLGA8RI6L899 631 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 RHOBTB3O94955 611 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 C6orf222P0C671 652 aaPredicted RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 ADSLP30566 484 aaPredicted RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 IST1P53990 364 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 CACNA2D1P54289 1103 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 KRT85P78386 507 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 MRPS15P82914 257 aaKnown RBP10.06□□□□□ -0.8
CDH1-205ENST00000562836 SKOR1P84550 965 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 ZNF124Q15973 351 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 TUBB8Q3ZCM7 444 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 SPDYAQ5MJ70 313 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 KLHL35Q6PF15 583 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 ZER1Q7Z7L7 766 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 TEX19Q8NA77 164 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 ATL1Q8WXF7 558 aa10.06□□□□□ -0.8
CDH1-205ENST00000562836 WDR24Q96S15 920 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms