RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 NEIL1Q96FI4 390 aaPredicted RBP6.41□□□□□ -1.38
SMG1-206ENST00000562668 C8orf37Q96NL8 207 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 DHRS4Q9BTZ2 278 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 HIRIP3Q9BW71 556 aaPredicted RBP6.41□□□□□ -1.38
SMG1-206ENST00000562668 SMURF1Q9HCE7 757 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 INCENPQ9NQS7 918 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 PCDHA9Q9Y5H5 950 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 KDM2BQ8NHM5 1336 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 ADGRL3Q9HAR2 1447 aa6.41□□□□□ -1.38
SMG1-206ENST00000562668 CDC42BPGQ6DT37 1551 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 USP32Q8NFA0 1604 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 FMN2Q9NZ56 1722 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 FOXS1O43638 330 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 C4BPAP04003 597 aaKnown RBP6.4□□□□□ -1.38
SMG1-206ENST00000562668 MC4RP32245 332 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 GTF2F1P35269 517 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMG1-206ENST00000562668 IL13RA1P78552 427 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 HS1BP3Q53T59 392 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 ZMAT1Q5H9K5 638 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 SPDYAQ5MJ70 313 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 SLC16A11Q8NCK7 471 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 GIMAP8Q8ND71 665 aaPredicted RBP6.4□□□□□ -1.38
SMG1-206ENST00000562668 ARMC5Q96C12 935 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 DEPDC7Q96QD5 511 aa6.4□□□□□ -1.38
SMG1-206ENST00000562668 QRICH2Q9H0J4 1663 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 KCNK3O14649 394 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 CLASP2O75122 1294 aaKnown RBP6.39□□□□□ -1.39
SMG1-206ENST00000562668 FSHBP01225 129 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 DNM2P50570 870 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 RRADP55042 308 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 RAC3P60763 192 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 HERVK_113P62684 666 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 ZC3H12BQ5HYM0 836 aaKnown RBP6.39□□□□□ -1.39
SMG1-206ENST00000562668 LRP10Q7Z4F1 713 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 Q8N1X5 172 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 CISD2Q8N5K1 135 aaKnown RBP6.39□□□□□ -1.39
SMG1-206ENST00000562668 VPS11Q9H270 941 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 SLC52A2Q9HAB3 445 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 SNTG2Q9NY99 539 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 BTBD7Q9P203 1132 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 NDOR1Q9UHB4 597 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 FBXO10Q9UK96 956 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 ZFR2Q9UPR6 939 aaKnown RBP6.39□□□□□ -1.39
SMG1-206ENST00000562668 TESMINQ9Y4I5 508 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 DCCP43146 1447 aa6.39□□□□□ -1.39
SMG1-206ENST00000562668 EFCAB14O75071 495 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 LACTBP83111 547 aaPredicted RBP6.38□□□□□ -1.39
SMG1-206ENST00000562668 STILQ15468 1287 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 RNF151Q2KHN1 245 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 KRTAP5-3Q6L8H2 238 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 CXXC5Q7LFL8 322 aaKnown RBP6.38□□□□□ -1.39
SMG1-206ENST00000562668 TAX1BP1Q86VP1 789 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 GSTCDQ8NEC7 633 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 SCYL1Q96KG9 808 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 ZNF747Q9BV97 191 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 ZDHHC5Q9C0B5 715 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 GALNT8Q9NY28 637 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 OAZ3Q9UMX2 235 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 MST1RQ04912 1400 aa6.38□□□□□ -1.39
SMG1-206ENST00000562668 RGPD8O14715 1765 aaPredicted RBP6.38□□□□□ -1.39
SMG1-206ENST00000562668 TOPAZ1Q8N9V7 1692 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 ROBO1Q9Y6N7 1651 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 TULP4Q9NRJ4 1543 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 FAM221BA6H8Z2 402 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 MPIG6BO95866 241 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 HMGCRP04035 888 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 ADCY8P40145 1251 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 GDF5P43026 501 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 NOSTRINQ8IVI9 506 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 PRAM1Q96QH2 718 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 SCAND2PQ9GZW5 306 aaPredicted RBP6.37□□□□□ -1.39
SMG1-206ENST00000562668 STK26Q9P289 416 aa6.37□□□□□ -1.39
SMG1-206ENST00000562668 NHSL1Q5SYE7 1610 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 ROCK2O75116 1388 aaKnown RBP6.36□□□□□ -1.39
SMG1-206ENST00000562668 RAD17O75943 681 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 RASGRP1O95267 797 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 APPP05067 770 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 MMEP08473 750 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 SEC23AQ15436 765 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 TRIM61Q5EBN2 209 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 FSTL4Q6MZW2 842 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 FUKQ8N0W3 1084 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 WNK4Q96J92 1243 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 BTBD2Q9BX70 525 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 CELF4Q9BZC1 486 aaKnown RBP6.36□□□□□ -1.39
SMG1-206ENST00000562668 KIAA1683Q9H0B3 1180 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 SFMBT1Q9UHJ3 866 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 NR2E1Q9Y466 385 aa6.36□□□□□ -1.39
SMG1-206ENST00000562668 C1orf167Q5SNV9 1468 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 MSH6P52701 1360 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 SBNO2Q9Y2G9 1366 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.35□□□□□ -1.39
SMG1-206ENST00000562668 ARHGAP6O43182 974 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 CR2P20023 1033 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 COMTP21964 271 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 KCNQ1P51787 676 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 NFYCQ13952 458 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 PRKD1Q15139 912 aaPredicted RBP6.35□□□□□ -1.39
SMG1-206ENST00000562668 TM4SF20Q53R12 229 aa6.35□□□□□ -1.39
SMG1-206ENST00000562668 KANK2Q63ZY3 851 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms