RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 IFI35P80217 286 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 KLRC3Q07444 240 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 AADACL2Q6P093 401 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 TAX1BP1Q86VP1 789 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 MYCT1Q8N699 235 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 C18orf8Q96DM3 657 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 PGM2Q96G03 612 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 ELAC2Q9BQ52 826 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 EPB41L4BQ9H329 900 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 TAS2R14Q9NYV8 317 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 BAIAP2L1Q9UHR4 511 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 TGFB1I1O43294 461 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 NMT1P30419 496 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 SHMT1P34896 483 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 SLCO1A2P46721 670 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 FMO5P49326 533 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 SNAP25P60880 206 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 MAPK7Q13164 816 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 LRRC34Q8IZ02 419 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 ALG3Q92685 438 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 MBOAT7Q96N66 472 aa15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 ZNF317Q96PQ6 595 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 PRMT1Q99873 361 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-202ENST00000561976 MEIS2O14770 477 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 KIAA0391O15091 583 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 SLURP2P0DP57 97 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 SLC8A1P32418 973 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 MMP13P45452 471 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 IFNAR2P48551 515 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 AP3B2Q13367 1082 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 ZC2HC1CQ53FD0 456 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 KSR1Q8IVT5 923 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 PIGOQ8TEQ8 1089 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 USP40Q9NVE5 1235 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 RGL1Q9NZL6 768 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 MTRF1LQ9UGC7 380 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 PPIP5K2O43314 1243 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 LRRN2O75325 713 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 TRIM49P0CI25 452 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 TRIM49CP0CI26 452 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 CYP2J2P51589 502 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 ELF3P78545 371 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 USH1GQ495M9 461 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 MOXD1Q6UVY6 613 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 ZDHHC24Q6UX98 284 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 CCDC63Q8NA47 563 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 ATXN2LQ8WWM7 1075 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 TBC1D31Q96DN5 1066 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 SEMA4AQ9H3S1 761 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 VEZTQ9HBM0 779 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 CTTNBP2NLQ9P2B4 639 aa15.1■□□□□ 0.01
VPS9D1-202ENST00000561976 ANKRD62A6NC57 917 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM86B1E9PN63 330 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 TBX3O15119 743 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 ASAP2O43150 1006 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM86B2P0C5J1 330 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 ZNF76P36508 570 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 COG2Q14746 738 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 CLUL1Q15846 466 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 C6orf118Q5T5N4 469 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 OLIG1Q8TAK6 271 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 BORCS6Q96GS4 357 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 CCNL1Q9UK58 526 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 COG5Q9UP83 839 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 ALG6Q9Y672 507 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 MGRN1O60291 552 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 PHF2O75151 1096 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 EYA4O95677 639 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 HLA-DOAP06340 250 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 GAP43P17677 238 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 FGFR4P22455 802 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 ADCY2Q08462 1091 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 IKQ13123 557 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 NBPF9Q3BBW0 867 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 CBWD6Q4V339 395 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 FAM133BQ5BKY9 247 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 CBWD3Q5JTY5 395 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 CBWD5Q5RIA9 395 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 PNMA8AQ86V59 439 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 PALB2Q86YC2 1186 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 UBL4BQ8N7F7 174 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 MAGEC3Q8TD91 643 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 EPS8L3Q8TE67 593 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 TCP11Q8WWU5 503 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 P2RX7Q99572 595 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 EIF2AK1Q9BQI3 630 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 INTS2Q9H0H0 1204 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 TRPC6Q9Y210 931 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 FRMD4BQ9Y2L6 1034 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 COL24A1Q17RW2 1714 aa15.09■□□□□ 0.01
VPS9D1-202ENST00000561976 AGTP01019 485 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 CLTAP09496 248 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 VCAM1P19320 739 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 RPL21P46778 160 aaKnown RBP15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 CTTNQ14247 550 aaKnown RBP15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 Q4G0T1 1027 aa15.08■□□□□ 0.01
VPS9D1-202ENST00000561976 RINT1Q6NUQ1 792 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms