RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 TNMDQ9H2S6 317 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 NPHP3-ACAD11A0A0J9YXS1 232 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 RRN3P2A6NIE6 340 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 TREHO43280 583 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 MAFO75444 373 aaPredicted RBP12.88□□□□□ -0.35
HERC1-214ENST00000561400 CDK7P50613 346 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 SOX10P56693 466 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 TBC1D8BQ0IIM8 1120 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 ZRSR2Q15696 482 aaKnown RBP12.88□□□□□ -0.35
HERC1-214ENST00000561400 CTAGE1Q96RT6 745 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
HERC1-214ENST00000561400 IGKV6-21A0A0C4DH24 114 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 C17orf102A2RUQ5 167 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 MBLAC1A4D2B0 266 aaPredicted RBP12.87□□□□□ -0.35
HERC1-214ENST00000561400 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 ARVCFO00192 962 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 DGAT1O75907 488 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 MBD3O95983 291 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 POLGP54098 1239 aaPredicted RBP12.87□□□□□ -0.35
HERC1-214ENST00000561400 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
HERC1-214ENST00000561400 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
HERC1-214ENST00000561400 DRP2Q13474 957 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 MTHFD1LQ6UB35 978 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 DYMQ7RTS9 669 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 DDX12PQ92771 950 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 MAGEF1Q9HAY2 307 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 TUBE1Q9UJT0 475 aa12.87□□□□□ -0.35
HERC1-214ENST00000561400 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 RFC5P40937 340 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
HERC1-214ENST00000561400 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
HERC1-214ENST00000561400 CUL4BQ13620 913 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 EMC2Q15006 297 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 UBE2Q1Q7Z7E8 422 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 LRRC71Q8N4P6 559 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 ERCC4Q92889 916 aaPredicted RBP12.86□□□□□ -0.35
HERC1-214ENST00000561400 DNAJC19Q96DA6 116 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 TRIM9Q9C026 710 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 GPRC5CQ9NQ84 441 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 TRMT13Q9NUP7 481 aaKnown RBP12.86□□□□□ -0.35
HERC1-214ENST00000561400 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 GNAT1P11488 350 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 CLCN3P51790 818 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 GYS2P54840 703 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 GIT2Q14161 759 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 CAMK4Q16566 473 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 EFCAB12Q6NXP0 572 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 DAW1Q8N136 415 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 LINC01465Q8N7H1 131 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 TMEM143Q96AN5 459 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 REEP2Q9BRK0 252 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 C11orf49Q9H6J7 331 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 SUDS3Q9H7L9 328 aaPredicted RBP12.86□□□□□ -0.35
HERC1-214ENST00000561400 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
HERC1-214ENST00000561400 MAGEB2O15479 319 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 B4GALT4O60513 344 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 AMPD3Q01432 767 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
HERC1-214ENST00000561400 MAPK7Q13164 816 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 PNOCQ13519 176 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 KANK3Q6NY19 840 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 RUFY4Q6ZNE9 571 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 NECAB2Q7Z6G3 386 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 TRPV6Q9H1D0 765 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 KCND2Q9NZV8 630 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 ALPK3Q96L96 1907 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 SNX17Q15036 470 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 POSTNQ15063 836 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 PTGISQ16647 500 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 KLHL40Q2TBA0 621 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 TNS4Q8IZW8 715 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 ATL2Q8NHH9 583 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 WNT8BQ93098 351 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 PDLIM2Q96JY6 352 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 PCDHA2Q9Y5H9 948 aa12.85□□□□□ -0.35
HERC1-214ENST00000561400 GTPBP6O43824 516 aaPredicted RBP12.84□□□□□ -0.35
HERC1-214ENST00000561400 HIP1RO75146 1068 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
HERC1-214ENST00000561400 CYP2C9P11712 490 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 DPYDQ12882 1025 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 ZSCAN26Q16670 478 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 FAM102BQ5T8I3 360 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 CNNM4Q6P4Q7 775 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 SERINC5Q86VE9 423 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 FAM126BQ8IXS8 530 aa12.84□□□□□ -0.35
HERC1-214ENST00000561400 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms