RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 SPECC1Q5M775 1068 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 RARS2Q5T160 578 aaKnown RBP13.38□□□□□ -0.27
IRF9-213ENST00000561342 OTOP3Q7RTS5 596 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
IRF9-213ENST00000561342 TRAPPC12Q8WVT3 735 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
IRF9-213ENST00000561342 PGBD1Q96JS3 809 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 TCEANC2Q96MN5 208 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 WNT16Q9UBV4 365 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 CEP131Q9UPN4 1083 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 PKD1L2Q7Z442 2459 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 CHD6Q8TD26 2715 aa13.38□□□□□ -0.27
IRF9-213ENST00000561342 FAM86B1E9PN63 330 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 MAGEB2O15479 319 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 PRPF3O43395 683 aaKnown RBP13.37□□□□□ -0.27
IRF9-213ENST00000561342 RPS6KA5O75582 802 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 PSAPP07602 524 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 FAM86B2P0C5J1 330 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 CIITAP33076 1130 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 AKAP17AQ02040 695 aaKnown RBP13.37□□□□□ -0.27
IRF9-213ENST00000561342 TMEM62Q0P6H9 643 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
IRF9-213ENST00000561342 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 SLC24A5Q71RS6 500 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 CCDC60Q8IWA6 550 aaPredicted RBP13.37□□□□□ -0.27
IRF9-213ENST00000561342 KIAA0319LQ8IZA0 1049 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 CCDC148Q8NFR7 591 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 KCNK12Q9HB15 430 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 TYW1Q9NV66 732 aaKnown RBP13.37□□□□□ -0.27
IRF9-213ENST00000561342 PCDHA10Q9Y5I2 948 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 MAFBQ9Y5Q3 323 aaPredicted RBP13.37□□□□□ -0.27
IRF9-213ENST00000561342 WDR87Q6ZQQ6 2873 aa13.37□□□□□ -0.27
IRF9-213ENST00000561342 DENND3A2RUS2 1198 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 DDX39AO00148 427 aaKnown RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 SPTLC1O15269 473 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 CFHP08603 1231 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 PSMA5P28066 241 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 ADD1P35611 737 aaKnown RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 CRYBB1P53674 252 aaPredicted RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 NFX1Q12986 1120 aaKnown RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 NONOQ15233 471 aaKnown RBP eCLIP13.36□□□□□ -0.27
IRF9-213ENST00000561342 C8orf34Q49A92 452 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 SWSAP1Q6NVH7 229 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 BLOC1S2Q6QNY1 142 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 TMEM87AQ8NBN3 555 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 AGXT2Q9BYV1 514 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 TMX1Q9H3N1 280 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 ELAC1Q9H777 363 aaKnown RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 UPF2Q9HAU5 1272 aaKnown RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 RGS18Q9NS28 235 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 DZANK1Q9NVP4 752 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 IGSF9Q9P2J2 1179 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
IRF9-213ENST00000561342 USP18Q9UMW8 372 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 SIT1Q9Y3P8 196 aa13.36□□□□□ -0.27
IRF9-213ENST00000561342 ZBTB42B2RXF5 422 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 HOXA2O43364 376 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 EPB41L2O43491 1005 aaKnown RBP13.35□□□□□ -0.27
IRF9-213ENST00000561342 C22orf31O95567 290 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 DCNP07585 359 aaKnown RBP13.35□□□□□ -0.27
IRF9-213ENST00000561342 TMOD1P28289 359 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 HSPA4P34932 840 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 CA8P35219 290 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 PPM1AP35813 382 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 PPM1JQ5JR12 505 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 Q6ZUG5 572 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 CCDC149Q6ZUS6 474 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 FAM177A1Q8N128 213 aaPredicted RBP13.35□□□□□ -0.27
IRF9-213ENST00000561342 MRPL43Q8N983 215 aaKnown RBP13.35□□□□□ -0.27
IRF9-213ENST00000561342 BRF1Q92994 677 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 ADAM2Q99965 735 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 C22orf23Q9BZE7 217 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 TBC1D17Q9HA65 648 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 SH3GLB2Q9NR46 395 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 TMEM161AQ9NX61 479 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 ST3GAL5Q9UNP4 418 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 GINS2Q9Y248 185 aa13.35□□□□□ -0.27
IRF9-213ENST00000561342 NOC2LQ9Y3T9 749 aaKnown RBP13.35□□□□□ -0.27
IRF9-213ENST00000561342 MAP1BP46821 2468 aaKnown RBP13.34□□□□□ -0.27
IRF9-213ENST00000561342 OTOGLQ3ZCN5 2332 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 KRBA1A5PL33 1030 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 WDR64B1ANS9 1081 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 C9IYK1 514 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 CLASP2O75122 1294 aaKnown RBP13.34□□□□□ -0.27
IRF9-213ENST00000561342 REC8O95072 547 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 IFNAR1P17181 557 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 ATP4AP20648 1035 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 FAM189BP81408 668 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 TMEM266Q2M3C6 531 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 PRR16Q569H4 304 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 C12orf76Q8N812 135 aaPredicted RBP13.34□□□□□ -0.27
IRF9-213ENST00000561342 ATRIPQ8WXE1 791 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 RSPH1Q8WYR4 309 aa13.34□□□□□ -0.27
IRF9-213ENST00000561342 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms