RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 PRDM12Q9H4Q4 367 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 RC3H2Q9HBD1 1191 aaKnown RBP15.47■□□□□ 0.07
TPM1-230ENST00000561266 ATP6V0A4Q9HBG4 840 aa15.47■□□□□ 0.07
TPM1-230ENST00000561266 MYH11P35749 1972 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 LINC01553A4QN01 128 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 F13A1P00488 732 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 LINC00271P0C7V0 271 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 CYP11B2P19099 503 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 MUTP22033 750 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 ADGRE1Q14246 886 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 ZRSR1Q15695 479 aaKnown RBP15.46■□□□□ 0.07
TPM1-230ENST00000561266 TMEM119Q4V9L6 283 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 KRT79Q5XKE5 535 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 PPP2R2DQ66LE6 453 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 ZNF410Q86VK4 478 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 RNF149Q8NC42 400 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 SP7Q8TDD2 431 aaPredicted RBP15.46■□□□□ 0.07
TPM1-230ENST00000561266 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 JPH2Q9BR39 696 aaPredicted RBP15.46■□□□□ 0.07
TPM1-230ENST00000561266 GCOM2Q9BZD3 368 aaPredicted RBP15.46■□□□□ 0.07
TPM1-230ENST00000561266 CSRNP2Q9H175 543 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 ZSCAN16Q9H4T2 348 aaPredicted RBP15.46■□□□□ 0.07
TPM1-230ENST00000561266 SLC28A3Q9HAS3 691 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 RGS18Q9NS28 235 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 RNF19AQ9NV58 838 aa15.46■□□□□ 0.07
TPM1-230ENST00000561266 COL4A4P53420 1690 aaPredicted RBP15.46■□□□□ 0.07
TPM1-230ENST00000561266 TMEM265A0A087WTH1 108 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 ARHGEF35A5YM69 484 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 EYA4O95677 639 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 NASPP49321 788 aaPredicted RBP15.45■□□□□ 0.06
TPM1-230ENST00000561266 FAM189BP81408 668 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 CABP7Q86V35 215 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 DAW1Q8N136 415 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 TCP11Q8WWU5 503 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 ZNF689Q96CS4 500 aaPredicted RBP15.45■□□□□ 0.06
TPM1-230ENST00000561266 EPSTI1Q96J88 318 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 RUSC1Q9BVN2 902 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 FTHL17Q9BXU8 183 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 RAB34Q9BZG1 259 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 BLOC1S4Q9NUP1 217 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 REV3LO60673 3130 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 ATG2AQ2TAZ0 1938 aa15.45■□□□□ 0.06
TPM1-230ENST00000561266 TTLL13PA6NNM8 815 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 GAS2O43903 313 aaKnown RBP15.44■□□□□ 0.06
TPM1-230ENST00000561266 DGKIO75912 1065 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 EDN1P05305 212 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 ATF7P17544 494 aaPredicted RBP15.44■□□□□ 0.06
TPM1-230ENST00000561266 HOXA11P31270 313 aaPredicted RBP15.44■□□□□ 0.06
TPM1-230ENST00000561266 SARSP49591 514 aaKnown RBP15.44■□□□□ 0.06
TPM1-230ENST00000561266 PTENP60484 403 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 MAPK7Q13164 816 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 SLC39A14Q15043 492 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 KARSQ15046 597 aaKnown RBP15.44■□□□□ 0.06
TPM1-230ENST00000561266 AMHR2Q16671 573 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 FAM102BQ5T8I3 360 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 RINT1Q6NUQ1 792 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 C1orf186Q6ZWK4 172 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 LINC00301Q8NCQ3 95 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 C17orf80Q9BSJ5 609 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 HCSTQ9UBK5 93 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 USP20Q9Y2K6 914 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 INSL6Q9Y581 213 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 SRPRBQ9Y5M8 271 aaKnown RBP15.44■□□□□ 0.06
TPM1-230ENST00000561266 TRANK1O15050 2925 aa15.44■□□□□ 0.06
TPM1-230ENST00000561266 PRRC2BQ5JSZ5 2229 aaKnown RBP15.43■□□□□ 0.06
TPM1-230ENST00000561266 NPHP3-ACAD11A0A0J9YXS1 232 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 DENND3A2RUS2 1198 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 MEIS3P2A8K0S8 358 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 ASAP2O43150 1006 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 BRD1O95696 1058 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 BMP15O95972 392 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 FGFR1P11362 822 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 LONP1P36776 959 aaKnown RBP15.43■□□□□ 0.06
TPM1-230ENST00000561266 SLC12A3P55017 1021 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 CDC42EP1Q00587 391 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 ARSHQ5FYA8 562 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 SRGAP1Q7Z6B7 1085 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
TPM1-230ENST00000561266 NPAS4Q8IUM7 802 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 EXOC8Q8IYI6 725 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 ZNF710Q8N1W2 664 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 CCDC43Q96MW1 224 aaKnown RBP15.43■□□□□ 0.06
TPM1-230ENST00000561266 YME1L1Q96TA2 773 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 DAXXQ9UER7 740 aaPredicted RBP15.43■□□□□ 0.06
TPM1-230ENST00000561266 MTUS1Q9ULD2 1270 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 DNM3Q9UQ16 869 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 RALGAPA2Q2PPJ7 1873 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 MYO7AQ13402 2215 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 ADGRA3Q8IWK6 1321 aa15.43■□□□□ 0.06
TPM1-230ENST00000561266 A0A087X0B3 334 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 B4GALT5O43286 388 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 LPXNO60711 386 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 PLCG1P19174 1290 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 DNM1Q05193 864 aaKnown RBP15.42■□□□□ 0.06
TPM1-230ENST00000561266 MBTD1Q05BQ5 628 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 MXD4Q14582 209 aaPredicted RBP15.42■□□□□ 0.06
TPM1-230ENST00000561266 LONRF3Q496Y0 759 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 PAN2Q504Q3 1202 aaKnown RBP15.42■□□□□ 0.06
TPM1-230ENST00000561266 UBXN11Q5T124 520 aa15.42■□□□□ 0.06
TPM1-230ENST00000561266 SLC24A5Q71RS6 500 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms