RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ZCCHC17Q9NP64 241 aaKnown RBP14.13□□□□□ -0.15
SNX1-211ENST00000560829 KMT5AQ9NQR1 393 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 KIAA1217Q5T5P2 1943 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 EMSYQ7Z589 1322 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 CCDC169A6NNP5 214 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 EXOC3O60645 756 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 CYP2J2P51589 502 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 POLGP54098 1239 aaPredicted RBP14.12□□□□□ -0.15
SNX1-211ENST00000560829 GRB14Q14449 540 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 HSDL1Q3SXM5 330 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 PDXDC1Q6P996 788 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 MAMDC4Q6UXC1 1216 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 PLPPR4Q7Z2D5 763 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 LSM14BQ9BX40 385 aaKnown RBP14.12□□□□□ -0.15
SNX1-211ENST00000560829 POLR3FQ9H1D9 316 aaPredicted RBP14.12□□□□□ -0.15
SNX1-211ENST00000560829 GANQ9H2C0 597 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 AZI2Q9H6S1 392 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 VTA1Q9NP79 307 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 ARHGAP28Q9P2N2 729 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 IVNS1ABPQ9Y6Y0 642 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 DENND3A2RUS2 1198 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 TXNP10599 105 aaKnown RBP14.12□□□□□ -0.15
SNX1-211ENST00000560829 MAPK4P31152 587 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 ARL2P36404 184 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 SLC26A2P50443 739 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 SOX10P56693 466 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 EXOC3L4Q17RC7 722 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 DCAF17Q5H9S7 520 aaPredicted RBP14.12□□□□□ -0.15
SNX1-211ENST00000560829 CACNA2D4Q7Z3S7 1137 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 GPR142Q7Z601 462 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 RASAL3Q86YV0 1011 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 DHX37Q8IY37 1157 aaKnown RBP14.12□□□□□ -0.15
SNX1-211ENST00000560829 MYRIPQ8NFW9 859 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 SLC7A3Q8WY07 619 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
SNX1-211ENST00000560829 IFT74Q96LB3 600 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 FBXL5Q9UKA1 691 aa14.12□□□□□ -0.15
SNX1-211ENST00000560829 PHLPP2Q6ZVD8 1323 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 ADGRA3Q8IWK6 1321 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 LRRC53A6NM62 1247 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 CYLC1P35663 651 aaPredicted RBP14.11□□□□□ -0.15
SNX1-211ENST00000560829 BFSP1Q12934 665 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 TCERG1LQ5VWI1 586 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 TAPT1Q6NXT6 567 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 ZNF662Q6ZS27 426 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 INTS8Q75QN2 995 aaKnown RBP14.11□□□□□ -0.15
SNX1-211ENST00000560829 RRAGAQ7L523 313 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 XXYLT1Q8NBI6 393 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 ACRBPQ8NEB7 543 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 CBWD1Q9BRT8 395 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 CRACR2AQ9BSW2 395 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 KATNBL1Q9H079 304 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 NHEJ1Q9H9Q4 299 aaPredicted RBP14.11□□□□□ -0.15
SNX1-211ENST00000560829 HSPBP1Q9NZL4 362 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 ADGRA2Q96PE1 1338 aa14.11□□□□□ -0.15
SNX1-211ENST00000560829 MANSC4A6NHS7 340 aaPredicted RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 EIF3CLB5ME19 914 aaKnown RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 TISP43B9A030 160 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 NOP56O00567 594 aaKnown RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 MAFO75444 373 aaPredicted RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 PON1P27169 355 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 GTF2F1P35269 517 aaKnown RBP eCLIP14.1□□□□□ -0.15
SNX1-211ENST00000560829 NAMPTP43490 491 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 BRDTQ58F21 947 aaPredicted RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 SYT10Q6XYQ8 523 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 ATP8B4Q8TF62 1192 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 SPATA33Q96N06 139 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 EIF3CQ99613 913 aaKnown RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 KIFC3Q9BVG8 833 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 PDGFCQ9NRA1 345 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 ARHGAP20Q9P2F6 1191 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 MYO6Q9UM54 1294 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 REXO2Q9Y3B8 237 aaKnown RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 CNGA1P29973 690 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 ADSSP30520 456 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 FMO5P49326 533 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 POLR2FP61218 127 aaKnown RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 KRT83P78385 493 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 ARHGAP1Q07960 439 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 KLHDC7AQ5VTJ3 777 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 PLEKHH3Q7Z736 793 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 EXOC8Q8IYI6 725 aa14.1□□□□□ -0.15
SNX1-211ENST00000560829 EMID1Q96A84 441 aaPredicted RBP14.1□□□□□ -0.15
SNX1-211ENST00000560829 ARID2Q68CP9 1835 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 SSU72P8A0A1W2PR75 194 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 ANKRD63C9JTQ0 380 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 GAS2O43903 313 aaKnown RBP14.09□□□□□ -0.15
SNX1-211ENST00000560829 SLC9A1P19634 815 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 GLRA2P23416 452 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 ZNF157P51786 506 aaPredicted RBP14.09□□□□□ -0.15
SNX1-211ENST00000560829 ENPEPQ07075 957 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
SNX1-211ENST00000560829 LAMC2Q13753 1193 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 TAS1R3Q7RTX0 852 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 SAPCD2Q86UD0 394 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 ASAP3Q8TDY4 903 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 ZNF592Q92610 1267 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 GLG1Q92896 1179 aa14.09□□□□□ -0.15
SNX1-211ENST00000560829 COPS5Q92905 334 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms