RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TWISTNBQ3B726 338 aaPredicted RBP7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 OVOS1Q6IE37 1185 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 NFXL1Q6ZNB6 911 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 SV2BQ7L1I2 683 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 UBE2Q1Q7Z7E8 422 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 AOPEPQ8N6M6 819 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 IGSF22Q8N9C0 903 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 C3orf20Q8ND61 904 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 SPDL1Q96EA4 605 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 PGBD1Q96JS3 809 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 MARK1Q9P0L2 795 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 MYO6Q9UM54 1294 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 INVSQ9Y283 1065 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 PTPN22Q9Y2R2 807 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 GIT1Q9Y2X7 761 aa7.38□□□□□ -1.23
TSPAN3-209ENST00000560715 IGSF1Q8N6C5 1336 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 TGFBR3LH3BV60 316 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 EIF3HO15372 352 aaKnown RBP eCLIP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 CRTAMO95727 393 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 ACTN3Q08043 901 aaPredicted RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 PDIA5Q14554 519 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 SNCBQ16143 134 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 PKN2Q16513 984 aaKnown RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 PRSS53Q2L4Q9 553 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 FILIP1LQ4L180 1135 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 TTLL7Q6ZT98 887 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 FASTKD5Q7L8L6 764 aaKnown RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 OVCH2Q7RTZ1 564 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 OR8K1Q8NGG5 319 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 LMBR1Q8WVP7 490 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 ZFPM2Q8WW38 1151 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 API5Q9BZZ5 524 aaKnown RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 SH2B1Q9NRF2 756 aaPredicted RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 IFNKQ9P0W0 207 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 PPP2R2CQ9Y2T4 447 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 PHRF1Q9P1Y6 1649 aaKnown RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 RTCAO00442 366 aaKnown RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 CHL1O00533 1208 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 RTN3O95197 1032 aaPredicted RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 LARGE1O95461 756 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 ITGAVP06756 1048 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 RXRBP28702 533 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 PEX19P40855 299 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 YARSP54577 528 aaKnown RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 VSNL1P62760 191 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 MAP3K12Q12852 859 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 PPFIA1Q13136 1202 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 SLC14A2Q15849 920 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 TIGD6Q17RP2 521 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 CCDC40Q4G0X9 1142 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 HIBCHQ6NVY1 386 aaPredicted RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 CEP85Q6P2H3 762 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 CCDC129Q6ZRS4 1044 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 CEP57Q86XR8 500 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 CCDC83Q8IWF9 413 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 TSPYL6Q8N831 410 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 RHPN1Q8TCX5 695 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 SUSD3Q96L08 255 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 ZSCAN31Q96LW9 406 aaPredicted RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 IRX2Q9BZI1 471 aaPredicted RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 ZC3H12CQ9C0D7 883 aaKnown RBP7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 VCPKMTQ9H867 229 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 COQ6Q9Y2Z9 468 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 KIAA0232Q92628 1395 aa7.37□□□□□ -1.23
TSPAN3-209ENST00000560715 TRAV20A0A0B4J274 112 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 IMPDH2P12268 514 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 OSMP13725 252 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 BPIP17213 487 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 XPAP23025 273 aaPredicted RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 ABCD1P33897 745 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 NPTX2P47972 431 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 NAP1L1P55209 391 aaKnown RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 KLF1Q13351 362 aaPredicted RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 KCNB1Q14721 858 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 SLC9A5Q14940 896 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 ZC3H12BQ5HYM0 836 aaKnown RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 FAM205BPQ63HN1 556 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 FAM173BQ6P4H8 233 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 CDC37L1Q7L3B6 337 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 NLRP8Q86W28 1048 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 NAT8LQ8N9F0 302 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 FAM76AQ8TAV0 307 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 GAL3ST3Q96A11 431 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 SDF4Q9BRK5 362 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 STK31Q9BXU1 1019 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 HYPKQ9NX55 129 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 ZSWIM5Q9P217 1185 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 SERPINB13Q9UIV8 391 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 PPM1HQ9ULR3 514 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 GTPBP10A4D1E9 387 aaKnown RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 ARHGAP6O43182 974 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 PDCP20941 246 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 HOXC9P31274 260 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 GRK6P43250 576 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 PHKA2P46019 1235 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 CDR1P51861 262 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 PFKPQ01813 784 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 TUBB2AQ13885 445 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 DCTN1Q14203 1278 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 MSS51Q4VC12 460 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms