RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 KCTD17Q8N5Z5 321 aa17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 PDILTQ8N807 584 aa17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 RNF149Q8NC42 400 aa17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 GCOM2Q9BZD3 368 aaPredicted RBP17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 ERVK-5Q9HDB9 667 aa17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 CHMP5Q9NZZ3 219 aa17.21■□□□□ 0.35
LYSMD2-204ENST00000560491 LAMA3Q16787 3333 aa17.21■□□□□ 0.34
LYSMD2-204ENST00000560491 LAMA2P24043 3122 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 TRIOBPQ9H2D6 2365 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 ABHD14A-ACY1A0A1B0GW23 586 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 BAIAP3O94812 1187 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 WDR5P61964 334 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 DEFB103AP81534 67 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 CDC42EP1Q00587 391 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 NAALADL2Q58DX5 795 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 RESP18Q5W5W9 173 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 LINC01599Q8WXQ3 324 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 BSNDQ8WZ55 320 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 APBB2Q92870 758 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 IPO9Q96P70 1041 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 MTIF3Q9H2K0 278 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 ST3GAL5Q9UNP4 418 aa17.2■□□□□ 0.34
LYSMD2-204ENST00000560491 GRXCR1A8MXD5 290 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 ASAP2O43150 1006 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 HIP1RO75146 1068 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 STAT6P42226 847 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 MAPK7Q13164 816 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 ARSHQ5FYA8 562 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 CCDC73Q6ZRK6 1079 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 TMCO2Q7Z6W1 182 aaPredicted RBP17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 DAW1Q8N136 415 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 MINDY3Q9H8M7 445 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 STK17AQ9UEE5 414 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 SLC4A7Q9Y6M7 1214 aa17.19■□□□□ 0.34
LYSMD2-204ENST00000560491 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 LRRIQ4A6NIV6 560 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 GPR182O15218 404 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 MGEA5O60502 916 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 PHKA2P46019 1235 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 KCNJ6P48051 423 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 TFDP1Q14186 410 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 HABP4Q5JVS0 413 aaKnown RBP17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 DHX58Q96C10 678 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
LYSMD2-204ENST00000560491 SFI1A8K8P3 1242 aa17.17■□□□□ 0.34
LYSMD2-204ENST00000560491 PTENP60484 403 aa17.17■□□□□ 0.34
LYSMD2-204ENST00000560491 E2F4Q16254 413 aa17.17■□□□□ 0.34
LYSMD2-204ENST00000560491 ADALQ6DHV7 355 aa17.17■□□□□ 0.34
LYSMD2-204ENST00000560491 RTN4RL1Q86UN2 441 aaPredicted RBP17.17■□□□□ 0.34
LYSMD2-204ENST00000560491 KIFAP3Q92845 792 aa17.17■□□□□ 0.34
LYSMD2-204ENST00000560491 REEP2Q9BRK0 252 aa17.17■□□□□ 0.34
LYSMD2-204ENST00000560491 A0A1B0GVL5 298 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 SOX1O00570 391 aaPredicted RBP17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 EFCAB14O75071 495 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 ATP2A2P16615 1042 aaKnown RBP17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 IBSPP21815 317 aaPredicted RBP17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 SFPQP23246 707 aaKnown RBP eCLIP17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 MBTD1Q05BQ5 628 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 LRIT3Q3SXY7 679 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 ODR4Q5SWX8 454 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 CATSPER4Q7RTX7 472 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 SRGAP1Q7Z6B7 1085 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 MYOCDQ8IZQ8 938 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 DRC1Q96MC2 740 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 SLC9A7Q96T83 725 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 TIPINQ9BVW5 301 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 FTHL17Q9BXU8 183 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 INO80BQ9C086 356 aaPredicted RBP17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 KCND2Q9NZV8 630 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 ADGRA3Q8IWK6 1321 aa17.16■□□□□ 0.34
LYSMD2-204ENST00000560491 INO80B-WBP1J3KQ70 363 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 ENPP3O14638 875 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 AMHP03971 560 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 KRT18P05783 430 aaKnown RBP17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 PFKFB1P16118 471 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 CMA1P23946 247 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 NAMPTP43490 491 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 RABGGTBP53611 331 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 PEX3P56589 373 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 POU5F1BQ06416 359 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 DSC3Q14574 896 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 PPP2R5AQ15172 486 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 CDCA2Q69YH5 1023 aaPredicted RBP17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 FAM117BQ6P1L5 589 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 SV2BQ7L1I2 683 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 IFNLR1Q8IU57 520 aaPredicted RBP17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 STAMQ92783 540 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms