RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 NAP1L1P55209 391 aaKnown RBP15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 CHMP4BP1P59074 171 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 ASIC2Q16515 512 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 Q3C1V9 767 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 SECISBP2LQ93073 1101 aaKnown RBP15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 PFASO15067 1338 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 ANKRD63C9JTQ0 380 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 NCK2O43639 380 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 CXCR5P32302 372 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 FMO5P49326 533 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 ALDH5A1P51649 535 aaPredicted RBP15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 STXBP2Q15833 593 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 IQCEQ6IPM2 695 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 RSRC2Q7L4I2 434 aaKnown RBP15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 PNMA2Q9UL42 364 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 MYO6Q9UM54 1294 aa15.38■□□□□ 0.05
CARMIL3-203ENST00000560349 MYH10P35580 1976 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 A0A0G2JLL6 359 aaPredicted RBP15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 DENND3A2RUS2 1198 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 SOWAHBA6NEL2 793 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 GFPT2O94808 682 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 LYPLA2O95372 231 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 SERPING1P05155 500 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 GCLMP48507 274 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 AMPD2Q01433 879 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 GNPTABQ3T906 1256 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 TMEM63BQ5T3F8 832 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 DPY19L2Q6NUT2 758 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 ZNF571Q7Z3V5 609 aaPredicted RBP15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 PRRT2Q7Z6L0 340 aaPredicted RBP15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 PLEKHO2Q8TD55 490 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 IQCDQ96DY2 449 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 DMAC2Q9NW81 257 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 SPATA31C2B4DYI2 1134 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 SASH3O75995 380 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 STBD1O95210 358 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 RHOXF2BP0C7M4 288 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 BFSP1Q12934 665 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 ARHGAP44Q17R89 818 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 ANKRD13AQ8IZ07 590 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 SAMD3Q8N6K7 520 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 TMEM143Q96AN5 459 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 RHOXF2Q9BQY4 288 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 XPNPEP1Q9NQW7 623 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 SMARCAL1Q9NZC9 954 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 HSPBP1Q9NZL4 362 aa15.37■□□□□ 0.05
CARMIL3-203ENST00000560349 PSAPP07602 524 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 CYP2C8P10632 490 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 ATP4AP20648 1035 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 UBA1P22314 1058 aaKnown RBP15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 LY6KQ17RY6 165 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 ABHD15Q6UXT9 468 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 CBWD2Q8IUF1 395 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 NOA1Q8NC60 698 aaKnown RBP15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 TMEM161BQ8NDZ6 487 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 ATP6V0A1Q93050 837 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 CCDC127Q96BQ5 260 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 ACCSQ96QU6 501 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 POP1Q99575 1024 aaKnown RBP15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 HINFPQ9BQA5 517 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 GOLPH3Q9H4A6 298 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 CNMDO75829 334 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 TBC1D8O95759 1140 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 ADRB2P07550 413 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 ADSSP30520 456 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 GJA5P36382 358 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 MYL7Q01449 175 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 PPP3CAQ08209 521 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 DMP1Q13316 513 aaPredicted RBP15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 MAP1SQ66K74 1059 aaPredicted RBP15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 XRRA1Q6P2D8 792 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 IRF2BP2Q7Z5L9 587 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 SRGAP1Q7Z6B7 1085 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 TRIM50Q86XT4 487 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 GPR161Q8N6U8 529 aaKnown RBP15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 KMT5AQ9NQR1 393 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 EHD2Q9NZN4 543 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 MYO1AQ9UBC5 1043 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 EMSYQ7Z589 1322 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 PAPPA2Q9BXP8 1791 aa15.36■□□□□ 0.05
CARMIL3-203ENST00000560349 MARK3P27448 753 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 NF2P35240 595 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 GPR162Q16538 588 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 CC2D1AQ6P1N0 951 aaPredicted RBP15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 CHST13Q8NET6 341 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 TOPORSQ9NS56 1045 aaPredicted RBP15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 TMCO5BA8MYB1 307 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 BRD2P25440 801 aaKnown RBP15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 PPATQ06203 517 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 RIOX2Q8IUF8 465 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 GOLGA1Q92805 767 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 MMS19Q96T76 1030 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 PARD6BQ9BYG5 372 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 EDEM3Q9BZQ6 932 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 CYP26B1Q9NR63 512 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 ANKEF1Q9NU02 776 aa15.35■□□□□ 0.05
CARMIL3-203ENST00000560349 PACSIN2Q9UNF0 486 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms