RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 RBM8AQ9Y5S9 174 aaKnown RBP5.22□□□□□ -1.57
LRRC28-218ENST00000560236 KIF21BO75037 1637 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 CUX1P39880 1505 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 PTPRMP28827 1452 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 MAN2A2P49641 1150 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 BPIFB4P59827 614 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 SLC25A3Q00325 362 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 TMEM177Q53S58 311 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 TRIM61Q5EBN2 209 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 PCSK4Q6UW60 755 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 RTN4RL1Q86UN2 441 aaPredicted RBP5.21□□□□□ -1.58
LRRC28-218ENST00000560236 IGSF22Q8N9C0 903 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 ANKRD53Q8N9V6 530 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 E2F7Q96AV8 911 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 FOXRED1Q96CU9 486 aaPredicted RBP5.21□□□□□ -1.58
LRRC28-218ENST00000560236 SCLYQ96I15 445 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 GPHA2Q96T91 129 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 TTPALQ9BTX7 342 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 ERICH3Q5RHP9 1530 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 RUSC2Q8N2Y8 1516 aa5.21□□□□□ -1.58
LRRC28-218ENST00000560236 TCRBV16S1A1N1A0A5B0 115 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 UBE2QL1A1L167 161 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 NPTXRO95502 500 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 KRT4P19013 534 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 ATP2B1P20020 1258 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 ROM1Q03395 351 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 TCIRG1Q13488 830 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 ELAVL1Q15717 326 aaKnown RBP5.2□□□□□ -1.58
LRRC28-218ENST00000560236 CC2D1AQ6P1N0 951 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-218ENST00000560236 FAM111BQ6SJ93 734 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 OR5AN1Q8NGI8 311 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 GPR87Q9BY21 358 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 NRDE2Q9H7Z3 1164 aa5.2□□□□□ -1.58
LRRC28-218ENST00000560236 CFAP43Q8NDM7 1665 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 C2orf78A6NCI8 922 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 TMEM191CA6NGB0 347 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 FOXN1O15353 648 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 RPS6KA4O75676 772 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 KCNA6P17658 529 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 RGS3P49796 1198 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 ANTXR2P58335 489 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 SLC6A3Q01959 620 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 TOB2Q14106 344 aaPredicted RBP5.19□□□□□ -1.58
LRRC28-218ENST00000560236 DGKDQ16760 1214 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 NAALADL2Q58DX5 795 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 LAIR1Q6GTX8 287 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 ABHD17CQ6PCB6 329 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 Q6ZPA2 131 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 BRAPQ7Z569 592 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 DEPDC7Q96QD5 511 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 BOCQ9BWV1 1114 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 TANGO6Q9C0B7 1094 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 GPRC5BQ9NZH0 403 aa5.19□□□□□ -1.58
LRRC28-218ENST00000560236 ABCC2Q92887 1545 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 BCORL1Q5H9F3 1711 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 KRT37O76014 449 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 PRLP01236 227 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 ZBTB48P10074 688 aaPredicted RBP5.18□□□□□ -1.58
LRRC28-218ENST00000560236 PTGS2P35354 604 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 FNTBP49356 437 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 RBM25P49756 843 aaKnown RBP5.18□□□□□ -1.58
LRRC28-218ENST00000560236 SMAD3P84022 425 aaKnown RBP5.18□□□□□ -1.58
LRRC28-218ENST00000560236 RASA3Q14644 834 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 GAGE13Q4V321 117 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 SLFN12LQ6IEE8 588 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 LRP10Q7Z4F1 713 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 RPUSD2Q8IZ73 545 aaKnown RBP5.18□□□□□ -1.58
LRRC28-218ENST00000560236 TCF25Q9BQ70 676 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 IL23AQ9NPF7 189 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 IGSF5Q9NSI5 407 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 RCAN3Q9UKA8 241 aa5.18□□□□□ -1.58
LRRC28-218ENST00000560236 FAM221BA6H8Z2 402 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 TRAF5O00463 557 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 FAM20BO75063 409 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 KIF11P52732 1056 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 ADAM8P78325 824 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 FSTL1Q12841 308 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 SERINC3Q13530 473 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 ARHGAP44Q17R89 818 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 FKBP15Q5T1M5 1219 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 KRT40Q6A162 431 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 OTOP1Q7RTM1 612 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 FGD2Q7Z6J4 655 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 PLA2G15Q8NCC3 412 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 ZSWIM2Q8NEG5 633 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 HAS1Q92839 578 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 NKD2Q969F2 451 aaPredicted RBP5.17□□□□□ -1.58
LRRC28-218ENST00000560236 MAML3Q96JK9 1138 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 WDR92Q96MX6 357 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 HIRIP3Q9BW71 556 aaPredicted RBP5.17□□□□□ -1.58
LRRC28-218ENST00000560236 MRPL4Q9BYD3 311 aaKnown RBP5.17□□□□□ -1.58
LRRC28-218ENST00000560236 SNTG2Q9NY99 539 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 KCMF1Q9P0J7 381 aa5.17□□□□□ -1.58
LRRC28-218ENST00000560236 EPRSP07814 1512 aaKnown RBP5.17□□□□□ -1.58
LRRC28-218ENST00000560236 IQSEC2Q5JU85 1478 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 CCDC163A0A0D9SF12 145 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 KCNQ2O43526 872 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 TOX4O94842 621 aa5.16□□□□□ -1.58
LRRC28-218ENST00000560236 GTF2F1P35269 517 aaKnown RBP eCLIP5.16□□□□□ -1.58
LRRC28-218ENST00000560236 DPY19L2P1Q6NXN4 242 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms