RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 KCNT2Q6UVM3 1135 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 ANO5Q75V66 913 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 ZNF410Q86VK4 478 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 NAP1L4Q99733 375 aaKnown RBP16.76■□□□□ 0.27
LRRC28-213ENST00000559399 TCF25Q9BQ70 676 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 MRPL9Q9BYD2 267 aaKnown RBP16.76■□□□□ 0.27
LRRC28-213ENST00000559399 ENTPD7Q9NQZ7 604 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 CHST12Q9NRB3 414 aa16.76■□□□□ 0.27
LRRC28-213ENST00000559399 A0A087WZ62 844 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 EML1O00423 815 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 CCNT1O60563 726 aaKnown RBP16.75■□□□□ 0.27
LRRC28-213ENST00000559399 SRGAP2BP0DMP2 458 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 PBX3P40426 434 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 QARSP47897 775 aaKnown RBP16.75■□□□□ 0.27
LRRC28-213ENST00000559399 KRT17Q04695 432 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 ANKRD1Q15327 319 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 PLPP4Q5VZY2 271 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 PIK3AP1Q6ZUJ8 805 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 ZNF598Q86UK7 904 aaKnown RBP16.75■□□□□ 0.27
LRRC28-213ENST00000559399 RHPN2Q8IUC4 686 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 HELQQ8TDG4 1101 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 SLC7A3Q8WY07 619 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 RSPH1Q8WYR4 309 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 WASF1Q92558 559 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 NLRP4Q96MN2 994 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 FDXACB1Q9BRP7 624 aaPredicted RBP16.75■□□□□ 0.27
LRRC28-213ENST00000559399 TRAIPQ9BWF2 469 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
LRRC28-213ENST00000559399 NGRNQ9NPE2 291 aaKnown RBP16.75■□□□□ 0.27
LRRC28-213ENST00000559399 CYP26B1Q9NR63 512 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 GJB4Q9NTQ9 266 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 SPG21Q9NZD8 308 aa16.75■□□□□ 0.27
LRRC28-213ENST00000559399 USP15Q9Y4E8 981 aaPredicted RBP16.75■□□□□ 0.27
LRRC28-213ENST00000559399 TBX3O15119 743 aa16.74■□□□□ 0.27
LRRC28-213ENST00000559399 MARCH6O60337 910 aa16.74■□□□□ 0.27
LRRC28-213ENST00000559399 SKIP12755 728 aa16.74■□□□□ 0.27
LRRC28-213ENST00000559399 ATF7P17544 494 aaPredicted RBP16.74■□□□□ 0.27
LRRC28-213ENST00000559399 PHKA2P46019 1235 aa16.74■□□□□ 0.27
LRRC28-213ENST00000559399 RBM10P98175 930 aaKnown RBP16.74■□□□□ 0.27
LRRC28-213ENST00000559399 TWF2Q6IBS0 349 aaKnown RBP16.74■□□□□ 0.27
LRRC28-213ENST00000559399 VN1R2Q8NFZ6 395 aa16.74■□□□□ 0.27
LRRC28-213ENST00000559399 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
LRRC28-213ENST00000559399 ORC3Q9UBD5 711 aaPredicted RBP16.74■□□□□ 0.27
LRRC28-213ENST00000559399 MUTYHQ9UIF7 546 aa16.74■□□□□ 0.27
LRRC28-213ENST00000559399 PIN4Q9Y237 131 aaKnown RBP16.74■□□□□ 0.27
LRRC28-213ENST00000559399 PPME1Q9Y570 386 aa16.74■□□□□ 0.27
LRRC28-213ENST00000559399 CTDNEP1O95476 244 aa16.73■□□□□ 0.27
LRRC28-213ENST00000559399 P4HBP07237 508 aaKnown RBP16.73■□□□□ 0.27
LRRC28-213ENST00000559399 AK2P54819 239 aa16.73■□□□□ 0.27
LRRC28-213ENST00000559399 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
LRRC28-213ENST00000559399 RNF135Q8IUD6 432 aa16.73■□□□□ 0.27
LRRC28-213ENST00000559399 EXOC8Q8IYI6 725 aa16.73■□□□□ 0.27
LRRC28-213ENST00000559399 SLC39A11Q8N1S5 342 aa16.73■□□□□ 0.27
LRRC28-213ENST00000559399 CEP170P1Q96L14 293 aa16.73■□□□□ 0.27
LRRC28-213ENST00000559399 BRMS1Q9HCU9 246 aa16.73■□□□□ 0.27
LRRC28-213ENST00000559399 DTNBO60941 627 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 RFC5P40937 340 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 RAB27AP51159 221 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 POLGP54098 1239 aaPredicted RBP16.72■□□□□ 0.27
LRRC28-213ENST00000559399 NPEPPSP55786 919 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 GLB1LQ6UWU2 654 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 TMEM184AQ6ZMB5 413 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 CATSPER4Q7RTX7 472 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 TMC7Q7Z402 723 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 KSR1Q8IVT5 923 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 HAS1Q92839 578 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 LXNQ9BS40 222 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 FAM105AQ9NUU6 356 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 WRAP73Q9P2S5 460 aaPredicted RBP16.72■□□□□ 0.27
LRRC28-213ENST00000559399 COL4A3BPQ9Y5P4 624 aa16.72■□□□□ 0.27
LRRC28-213ENST00000559399 HIDE1A8MVS5 230 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 LOC730098B7Z3J9 87 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 YWHABP31946 246 aaKnown RBP16.71■□□□□ 0.27
LRRC28-213ENST00000559399 KRT2P35908 639 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 ALDH7A1P49419 539 aaKnown RBP16.71■□□□□ 0.27
LRRC28-213ENST00000559399 BCAR1P56945 870 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 NR5A1Q13285 461 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 KCNC3Q14003 757 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 SMC1AQ14683 1233 aaKnown RBP16.71■□□□□ 0.27
LRRC28-213ENST00000559399 EPHA7Q15375 998 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 EARS2Q5JPH6 523 aaKnown RBP16.71■□□□□ 0.27
LRRC28-213ENST00000559399 NCAPH2Q6IBW4 605 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 C4orf19Q8IY42 314 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 SLFN12Q8IYM2 578 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 PSPC1Q8WXF1 523 aaKnown RBP16.71■□□□□ 0.27
LRRC28-213ENST00000559399 SUSD6Q92537 303 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 PHF7Q9BWX1 381 aaPredicted RBP16.71■□□□□ 0.27
LRRC28-213ENST00000559399 DHX33Q9H6R0 707 aaKnown RBP16.71■□□□□ 0.27
LRRC28-213ENST00000559399 AGPAT5Q9NUQ2 364 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 PPP4R2Q9NY27 417 aa16.71■□□□□ 0.27
LRRC28-213ENST00000559399 CARNS1A5YM72 827 aa16.7■□□□□ 0.26
LRRC28-213ENST00000559399 GAS2O43903 313 aaKnown RBP16.7■□□□□ 0.26
LRRC28-213ENST00000559399 ZC3H11AO75152 810 aaKnown RBP eCLIP16.7■□□□□ 0.26
LRRC28-213ENST00000559399 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
LRRC28-213ENST00000559399 TECP42680 631 aa16.7■□□□□ 0.26
LRRC28-213ENST00000559399 SPIRE1Q08AE8 756 aa16.7■□□□□ 0.26
LRRC28-213ENST00000559399 CBX2Q14781 532 aaPredicted RBP16.7■□□□□ 0.26
LRRC28-213ENST00000559399 ANKRD54Q6NXT1 300 aa16.7■□□□□ 0.26
LRRC28-213ENST00000559399 LLGL2Q6P1M3 1020 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms