RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 APOBEC2Q9Y235 224 aaKnown RBP5.23□□□□□ -1.57
VPS13C-207ENST00000558919 SLC30A1Q9Y6M5 507 aa5.23□□□□□ -1.57
VPS13C-207ENST00000558919 CADPSQ9ULU8 1353 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 ST20-MTHFSA0A0A6YYL1 179 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-207ENST00000558919 C2orf78A6NCI8 922 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 NEMP1O14524 444 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 DAPK3O43293 454 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 SLC26A4O43511 780 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 FOXS1O43638 330 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 RAB11FIP3O75154 756 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 RAD17O75943 681 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 ZNF20P17024 532 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 ADCY7P51828 1080 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 STRN3Q13033 797 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 MAN2A1Q16706 1144 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 CT47A1Q5JQC4 288 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-207ENST00000558919 ZBTB41Q5SVQ8 909 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 STRA8Q7Z7C7 330 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 CXorf67Q86X51 503 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-207ENST00000558919 FUKQ8N0W3 1084 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 AFAP1L2Q8N4X5 818 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 UBR7Q8N806 425 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 PPP1R14CQ8TAE6 165 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 GCDHQ92947 438 aaPredicted RBP5.22□□□□□ -1.57
VPS13C-207ENST00000558919 CDK5RAP1Q96SZ6 601 aaKnown RBP5.22□□□□□ -1.57
VPS13C-207ENST00000558919 NOL10Q9BSC4 688 aaKnown RBP5.22□□□□□ -1.57
VPS13C-207ENST00000558919 PLA2G12BQ9BX93 195 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 DEF6Q9H4E7 631 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 DNAI1Q9UI46 699 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 NOC2LQ9Y3T9 749 aaKnown RBP5.22□□□□□ -1.57
VPS13C-207ENST00000558919 TCAF1Q9Y4C2 921 aa5.22□□□□□ -1.57
VPS13C-207ENST00000558919 PFKMP08237 780 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 CPEP16870 476 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 GPR15P49685 360 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 SELENOPP49908 381 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 SESN3P58005 492 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 KRTAP10-2P60368 255 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 GAGE13Q4V321 117 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 HS1BP3Q53T59 392 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 POLNQ7Z5Q5 900 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 CLEC14AQ86T13 490 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 CDYL2Q8N8U2 506 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 PLA2G15Q8NCC3 412 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 BORCS6Q96GS4 357 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 WWC2-AS2Q96NR7 200 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 KLC2Q9H0B6 622 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 JAG2Q9Y219 1238 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 PCDHB6Q9Y5E3 794 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 NUMBLQ9Y6R0 609 aa5.21□□□□□ -1.58
VPS13C-207ENST00000558919 A0A0A6YYK5 440 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-207ENST00000558919 PRSS38A1L453 326 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 LCHNA4D1U4 455 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 C1QTNF3-AMACRE9PGA6 284 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 KDM1AO60341 852 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 FSBPO95073 299 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 PCDH8O95206 1070 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 COMTP21964 271 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 ID4P47928 161 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 MANFP55145 182 aaKnown RBP5.2□□□□□ -1.58
VPS13C-207ENST00000558919 ATP2C1P98194 919 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-207ENST00000558919 TCIRG1Q13488 830 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 CCDC178Q5BJE1 867 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 GPR135Q8IZ08 494 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 SHCBP1Q8NEM2 672 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 RSAD2Q8WXG1 361 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 EDAQ92838 391 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 OR14A2Q96R54 314 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 GPR20Q99678 358 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 SOX7Q9BT81 388 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 MS4A5Q9H3V2 200 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 TSC22D4Q9Y3Q8 395 aa5.2□□□□□ -1.58
VPS13C-207ENST00000558919 RBM8AQ9Y5S9 174 aaKnown RBP5.2□□□□□ -1.58
VPS13C-207ENST00000558919 EYA4O95677 639 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 VSIG10L2P0DP72 767 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 HNRNPLP14866 589 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS13C-207ENST00000558919 BPIFB4P59827 614 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 ADAM8P78325 824 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 FAPQ12884 760 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 RIN1Q13671 783 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 ZNF585AQ6P3V2 769 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 DBX2Q6ZNG2 339 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 CLRN3Q8NCR9 226 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 C14orf93Q9H972 538 aaKnown RBP5.19□□□□□ -1.58
VPS13C-207ENST00000558919 TMPRSS11EQ9UL52 423 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 MYRFQ9Y2G1 1151 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 TESMINQ9Y4I5 508 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 PPP2R3BQ9Y5P8 575 aa5.19□□□□□ -1.58
VPS13C-207ENST00000558919 MUSKO15146 869 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 MTSS1O43312 755 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 NRP2O60462 931 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 SEC24DO94855 1032 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-207ENST00000558919 JUNP05412 331 aaKnown RBP5.18□□□□□ -1.58
VPS13C-207ENST00000558919 XPAP23025 273 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-207ENST00000558919 CNGA1P29973 690 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 KIR2DL3P43628 341 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 STAT4Q14765 748 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 GRM7Q14831 915 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 R3HDM1Q15032 1099 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms