RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 DHX33Q9H6R0 707 aaKnown RBP6.24□□□□□ -1.41
SMAD3-209ENST00000558894 MINDY3Q9H8M7 445 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 PPP4R2Q9NY27 417 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 PRKAG3Q9UGI9 489 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 DDX25Q9UHL0 483 aaKnown RBP6.24□□□□□ -1.41
SMAD3-209ENST00000558894 AKT3Q9Y243 479 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 TECTAO75443 2155 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 MYO15AQ9UKN7 3530 aa6.24□□□□□ -1.41
SMAD3-209ENST00000558894 FAM86C2PA6NEL3 165 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 HIDE1A8MVS5 230 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 CPLX1O14810 134 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 TBX3O15119 743 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 NCK2O43639 380 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 JAK2O60674 1132 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 SLITRK3O94933 977 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 EOMESO95936 686 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 HOXA11P31270 313 aaPredicted RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 PBX3P40426 434 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 NRIP1P48552 1158 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 VASPP50552 380 aaPredicted RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 PSMC5P62195 406 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 UBE3AQ05086 875 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 TBC1D8BQ0IIM8 1120 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 CLUL1Q15846 466 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 DUSP6Q16828 381 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 ODR4Q5SWX8 454 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 UBXN11Q5T124 520 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 ERICH6BQ5W0A0 696 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 PIK3AP1Q6ZUJ8 805 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 NEK8Q86SG6 692 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 RBM23Q86U06 439 aaKnown RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 ALYREFQ86V81 257 aaKnown RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 TMEM173Q86WV6 379 aaPredicted RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 ADHFE1Q8IWW8 467 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 SLC39A11Q8N1S5 342 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 ZNF710Q8N1W2 664 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 SMRP1Q8NCR6 262 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 NSUN7Q8NE18 718 aaKnown RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 BCL7CQ8WUZ0 217 aaPredicted RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 SUSD6Q92537 303 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 FAM20AQ96MK3 541 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 MTMR9Q96QG7 549 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 MAP7D2Q96T17 732 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 KIF2CQ99661 725 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 HSD17B14Q9BPX1 270 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 VN1R3Q9BXE9 311 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 TMEM117Q9H0C3 514 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 S1PR5Q9H228 398 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 SLKQ9H2G2 1235 aaPredicted RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 IGFLR1Q9H665 355 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 ATP6V0A4Q9HBG4 840 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 XPNPEP1Q9NQW7 623 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 CYP26B1Q9NR63 512 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 CHST12Q9NRB3 414 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 RGL1Q9NZL6 768 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 SEPT9Q9UHD8 586 aaPredicted RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 LRFN2Q9ULH4 789 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 BARX2Q9UMQ3 279 aaPredicted RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 LZTS1Q9Y250 596 aa6.23□□□□□ -1.41
SMAD3-209ENST00000558894 PDCD11Q14690 1871 aaKnown RBP6.23□□□□□ -1.41
SMAD3-209ENST00000558894 MYO10Q9HD67 2058 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 USP34Q70CQ2 3546 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 SPDYE4A6NLX3 237 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 DDX11L8A8MPP1 907 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 BTBD18B2RXH4 712 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 LOC730098B7Z3J9 87 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 PER2O15055 1255 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 CCNT1O60563 726 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 ZNF623O75123 536 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 CDKL5O76039 1030 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 CSPG5O95196 566 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 LYPLA2O95372 231 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 EFEMP2O95967 443 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 P4HBP07237 508 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 LAG3P18627 525 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 IBSPP21815 317 aaPredicted RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 TMOD1P28289 359 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 PHKA2P46019 1235 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 QARSP47897 775 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 AFF1P51825 1210 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 SMAD4Q13485 552 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 CBX2Q14781 532 aaPredicted RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 EPHA7Q15375 998 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 TMEM31Q5JXX7 168 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 SYCE2Q6PIF2 218 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 CPLX2Q6PUV4 134 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 KCNT2Q6UVM3 1135 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 MRPL10Q7Z7H8 261 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 ZNF410Q86VK4 478 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 RHPN2Q8IUC4 686 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 C4orf19Q8IY42 314 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 FEZF2Q8TBJ5 459 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 HELQQ8TDG4 1101 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 PRPF31Q8WWY3 499 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 MRPS27Q92552 414 aaKnown RBP6.22□□□□□ -1.41
SMAD3-209ENST00000558894 LPPQ93052 612 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 DYDC2Q96IM9 177 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 LXNQ9BS40 222 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 TLR9Q9NR96 1032 aa6.22□□□□□ -1.41
SMAD3-209ENST00000558894 SUCLA2Q9P2R7 463 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms