RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 THAP9Q9H5L6 903 aa12.35□□□□□ -0.43
HMG20A-206ENST00000558845 MRPL44Q9H9J2 332 aaKnown RBP12.35□□□□□ -0.43
HMG20A-206ENST00000558845 SPC25Q9HBM1 224 aa12.35□□□□□ -0.43
HMG20A-206ENST00000558845 CGNQ9P2M7 1197 aaKnown RBP12.35□□□□□ -0.43
HMG20A-206ENST00000558845 PHLPP2Q6ZVD8 1323 aa12.35□□□□□ -0.43
HMG20A-206ENST00000558845 PDXKO00764 312 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 ADAMTS4O75173 837 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 C22orf31O95567 290 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 FGFR1OPO95684 399 aaKnown RBP12.34□□□□□ -0.43
HMG20A-206ENST00000558845 ELNP15502 786 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 CDK11BP21127 795 aaKnown RBP12.34□□□□□ -0.43
HMG20A-206ENST00000558845 HOXC8P31273 242 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 NAMPTP43490 491 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 CASP5P51878 434 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 SMTNP53814 917 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 POU5F1BQ06416 359 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 SPAG1Q07617 926 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 DMP1Q13316 513 aaPredicted RBP12.34□□□□□ -0.43
HMG20A-206ENST00000558845 MYBPC2Q14324 1141 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 FAM102BQ5T8I3 360 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 GLIS3Q8NEA6 775 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 KLHDC9Q8NEP7 349 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 KAT2BQ92831 832 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 TSG101Q99816 390 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 DUSP9Q99956 384 aaKnown RBP12.34□□□□□ -0.43
HMG20A-206ENST00000558845 FGFBP2Q9BYJ0 223 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 TMEM206Q9H813 350 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 ARHGAP28Q9P2N2 729 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 MAPK8IP1Q9UQF2 711 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 MYH11P35749 1972 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 NRCAMQ92823 1304 aa12.34□□□□□ -0.43
HMG20A-206ENST00000558845 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 SFI1A8K8P3 1242 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 ASAP2O43150 1006 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 ZEB2O60315 1214 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 GCNT3O95395 438 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 ZNF286BP0CG31 522 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 MYBP10242 640 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 INSRRP14616 1297 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 MARK3P27448 753 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 GRK4P32298 578 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 HOXD13P35453 343 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 NPTX2P47972 431 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
HMG20A-206ENST00000558845 PURAQ00577 322 aaKnown RBP12.33□□□□□ -0.44
HMG20A-206ENST00000558845 FKBP3Q00688 224 aaKnown RBP12.33□□□□□ -0.44
HMG20A-206ENST00000558845 TRIM32Q13049 653 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 MXD4Q14582 209 aaPredicted RBP12.33□□□□□ -0.44
HMG20A-206ENST00000558845 ANKRD40Q6AI12 368 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 TMEM161BQ8NDZ6 487 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 GOLGA5Q8TBA6 731 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 IFT74Q96LB3 600 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 CEP63Q96MT8 703 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 SH2D3AQ9BRG2 576 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 POLR3FQ9H1D9 316 aaPredicted RBP12.33□□□□□ -0.44
HMG20A-206ENST00000558845 GPRC5CQ9NQ84 441 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 TYW1Q9NV66 732 aaKnown RBP12.33□□□□□ -0.44
HMG20A-206ENST00000558845 FANCLQ9NW38 375 aa12.33□□□□□ -0.44
HMG20A-206ENST00000558845 DDX20Q9UHI6 824 aaKnown RBP12.33□□□□□ -0.44
HMG20A-206ENST00000558845 MBLAC1A4D2B0 266 aaPredicted RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 K7ENM7 598 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 GLRA2P23416 452 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 EEF1GP26641 437 aaKnown RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 CCND3P30281 292 aaPredicted RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 NMT1P30419 496 aaKnown RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 PSEN2P49810 448 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 MARSP56192 900 aaKnown RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 PEX3P56589 373 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 STX17P56962 302 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 ADAM17P78536 824 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 PPFIA1Q13136 1202 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 MFSD10Q14728 455 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 LRRC41Q15345 812 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 CCSAPQ6IQ19 270 aaPredicted RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 TMEM92Q6UXU6 159 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 LRRC55Q6ZSA7 311 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 HAUS6Q7Z4H7 955 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 SLC9A9Q8IVB4 645 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 MAP4K3Q8IVH8 894 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 C12orf56Q8IXR9 622 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 CSGALNACT2Q8N6G5 542 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 PSPC1Q8WXF1 523 aaKnown RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 BSNDQ8WZ55 320 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 ANP32BQ92688 251 aaKnown RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 LENG1Q96BZ8 264 aaPredicted RBP12.32□□□□□ -0.44
HMG20A-206ENST00000558845 PDLIM2Q96JY6 352 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 NFKBIZQ9BYH8 718 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 XPNPEP3Q9NQH7 507 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 KMT5AQ9NQR1 393 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 TBC1D7Q9P0N9 293 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 EXOC7Q9UPT5 735 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 TRIM17Q9Y577 477 aa12.32□□□□□ -0.44
HMG20A-206ENST00000558845 ZMYM2Q9UBW7 1377 aa12.31□□□□□ -0.44
HMG20A-206ENST00000558845 SCN10AQ9Y5Y9 1956 aa12.31□□□□□ -0.44
HMG20A-206ENST00000558845 TRIM49BA6NDI0 452 aa12.31□□□□□ -0.44
HMG20A-206ENST00000558845 TGFB1I1O43294 461 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms