RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TRIM73Q86UV7 250 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 PROSER2Q86WR7 435 aaPredicted RBP12.09□□□□□ -0.47
PCAT29-201ENST00000558411 RAD54LQ92698 747 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 ARHGEF2Q92974 986 aaKnown RBP12.09□□□□□ -0.47
PCAT29-201ENST00000558411 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
PCAT29-201ENST00000558411 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 PCMTD2Q9NV79 361 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 BARHL2Q9NY43 387 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 DBR1Q9UK59 544 aaKnown RBP12.09□□□□□ -0.47
PCAT29-201ENST00000558411 NR2E1Q9Y466 385 aa12.09□□□□□ -0.47
PCAT29-201ENST00000558411 EIF4E1BA6NMX2 242 aaKnown RBP12.08□□□□□ -0.47
PCAT29-201ENST00000558411 IRS4O14654 1257 aaPredicted RBP12.08□□□□□ -0.47
PCAT29-201ENST00000558411 CREB3O43889 395 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 SKIP12755 728 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 MAGEA8P43361 318 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 RANBP1P43487 201 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 SLCO1A2P46721 670 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.47
PCAT29-201ENST00000558411 ZC3H6P61129 1189 aaKnown RBP12.08□□□□□ -0.47
PCAT29-201ENST00000558411 OCRLQ01968 901 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 LRRC14Q15048 493 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 NONOQ15233 471 aaKnown RBP eCLIP12.08□□□□□ -0.47
PCAT29-201ENST00000558411 ENOX2Q16206 610 aaKnown RBP12.08□□□□□ -0.47
PCAT29-201ENST00000558411 ZNF568Q3ZCX4 644 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 RNF220Q5VTB9 566 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 CGB2Q6NT52 195 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 ARHGEF18Q6ZSZ5 1173 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 DYMQ7RTS9 669 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 NLRP10Q86W26 655 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 PNMA5Q96PV4 448 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 TLE6Q9H808 572 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 PDP2Q9P2J9 529 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 SLC4A7Q9Y6M7 1214 aa12.08□□□□□ -0.47
PCAT29-201ENST00000558411 NHSL1Q5SYE7 1610 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
PCAT29-201ENST00000558411 SIGLEC16A6NMB1 481 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 SMIM22K7EJ46 135 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 CCNT1O60563 726 aaKnown RBP12.08□□□□□ -0.48
PCAT29-201ENST00000558411 HNRNPCL1O60812 293 aaKnown RBP12.08□□□□□ -0.48
PCAT29-201ENST00000558411 GGPS1O95749 300 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 PENKP01210 267 aaPredicted RBP12.08□□□□□ -0.48
PCAT29-201ENST00000558411 ALAS1P13196 640 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 UCHL3P15374 230 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 GM2AP17900 193 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 RPL21P46778 160 aaKnown RBP12.08□□□□□ -0.48
PCAT29-201ENST00000558411 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
PCAT29-201ENST00000558411 SH3BGRP55822 239 aaPredicted RBP12.08□□□□□ -0.48
PCAT29-201ENST00000558411 POLE2P56282 527 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 PPATQ06203 517 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 STRN3Q13033 797 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 DCAF12L1Q5VU92 463 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 CYFIP1Q7L576 1253 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 ADGRA1Q86SQ6 560 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 MGARPQ8TDB4 240 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 GLG1Q92896 1179 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 ART4Q93070 314 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 CDK5RAP3Q96JB5 506 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 ZWILCHQ9H900 591 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 STARD13Q9Y3M8 1113 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 PCDHA3Q9Y5H8 950 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
PCAT29-201ENST00000558411 SYNGAP1Q96PV0 1343 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 MAGEA13PA6NCF6 341 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 DCTN3O75935 186 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 FGFR4P22455 802 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 STX2P32856 288 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 GRM4Q14833 912 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 PTPROQ16827 1216 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 PPP1R21Q6ZMI0 780 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 NEK8Q86SG6 692 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 VSIG1Q86XK7 387 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 SYNE4Q8N205 404 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 SLC17A8Q8NDX2 589 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 RFFLQ8WZ73 363 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 DDX12PQ92771 950 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 PTPRN2Q92932 1015 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 AZIN2Q96A70 460 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 VCX3BQ9H321 246 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 ERVK-5Q9HDB9 667 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 VCX3AQ9NNX9 186 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 PHF24Q9UPV7 400 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 USH1CQ9Y6N9 552 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 CYP2D7A0A087X1C5 515 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 MAPK13O15264 365 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 TCEA3O75764 348 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 TTLL1O95922 423 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 TMEM253P0C7T8 217 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 PYGBP11216 843 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 RASA1P20936 1047 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 KCNH2Q12809 1159 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 COASYQ13057 564 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 LRRC41Q15345 812 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 LETM2Q2VYF4 491 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 EDRF1Q3B7T1 1238 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 SOGA3Q5TF21 947 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 TOM1L2Q6ZVM7 507 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 LONP2Q86WA8 852 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 NCAPG2Q86XI2 1143 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms