RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SMC1AQ14683 1233 aaKnown RBP15.89■□□□□ 0.13
SLIRP-210ENST00000557431 LRCH2Q5VUJ6 765 aa15.89■□□□□ 0.13
SLIRP-210ENST00000557431 KSR1Q8IVT5 923 aa15.89■□□□□ 0.13
SLIRP-210ENST00000557431 TEX2Q8IWB9 1127 aa15.89■□□□□ 0.13
SLIRP-210ENST00000557431 KREMEN2Q8NCW0 462 aa15.89■□□□□ 0.13
SLIRP-210ENST00000557431 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
SLIRP-210ENST00000557431 FDXACB1Q9BRP7 624 aaPredicted RBP15.89■□□□□ 0.13
SLIRP-210ENST00000557431 LARP6Q9BRS8 491 aaKnown RBP15.89■□□□□ 0.13
SLIRP-210ENST00000557431 TEKT3Q9BXF9 490 aa15.89■□□□□ 0.13
SLIRP-210ENST00000557431 NGRNQ9NPE2 291 aaKnown RBP15.89■□□□□ 0.13
SLIRP-210ENST00000557431 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
SLIRP-210ENST00000557431 INPP5FQ9Y2H2 1132 aa15.89■□□□□ 0.13
SLIRP-210ENST00000557431 H0Y858 1186 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 B4GALT3O60512 393 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 BRD1O95696 1058 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 EPCAMP16422 314 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 GNA11P29992 359 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 PPM1AP35813 382 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 AKAP17AQ02040 695 aaKnown RBP15.88■□□□□ 0.13
SLIRP-210ENST00000557431 KRT17Q04695 432 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 BLOC1S2Q6QNY1 142 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 MIER3Q7Z3K6 550 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 TBCKQ8TEA7 893 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 CASP10Q92851 521 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 SLC5A5Q92911 643 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 GBP3Q9H0R5 595 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 NRBP2Q9NSY0 501 aa15.88■□□□□ 0.13
SLIRP-210ENST00000557431 TRIP11Q15643 1979 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 USP34Q70CQ2 3546 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 A0A0U1RQF3 1178 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 CCDC196A0A1B0GTZ2 297 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.87■□□□□ 0.13
SLIRP-210ENST00000557431 STBD1O95210 358 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 CXCL14O95715 111 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 RPS6KB1P23443 525 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 NLRP5P59047 1200 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 TARBP2Q15633 366 aaKnown RBP15.87■□□□□ 0.13
SLIRP-210ENST00000557431 PLA2G4FQ68DD2 849 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 VPS52Q8N1B4 723 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 MRPL43Q8N983 215 aaKnown RBP15.87■□□□□ 0.13
SLIRP-210ENST00000557431 CCDC148Q8NFR7 591 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 RIPOR3Q96MK2 946 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 AIFM3Q96NN9 605 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 CEP89Q96ST8 783 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 ZBP1Q9H171 429 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 BMP2KQ9NSY1 1161 aaPredicted RBP15.87■□□□□ 0.13
SLIRP-210ENST00000557431 DNAJB4Q9UDY4 337 aa15.87■□□□□ 0.13
SLIRP-210ENST00000557431 FSD2A1L4K1 749 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 PSMD10O75832 226 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 HMGB1P09429 215 aaKnown RBP15.86■□□□□ 0.13
SLIRP-210ENST00000557431 PHKA2P46019 1235 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 TWF2Q6IBS0 349 aaKnown RBP15.86■□□□□ 0.13
SLIRP-210ENST00000557431 RHPN2Q8IUC4 686 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 ATOH1Q92858 354 aaPredicted RBP15.86■□□□□ 0.13
SLIRP-210ENST00000557431 KCNB2Q92953 911 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 TMEM169Q96HH4 297 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 NLRP4Q96MN2 994 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 VN1R3Q9BXE9 311 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 RNF26Q9BY78 433 aaPredicted RBP15.86■□□□□ 0.13
SLIRP-210ENST00000557431 NRDE2Q9H7Z3 1164 aa15.86■□□□□ 0.13
SLIRP-210ENST00000557431 PIN4Q9Y237 131 aaKnown RBP15.86■□□□□ 0.13
SLIRP-210ENST00000557431 GFRA3O60609 400 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 SSBP05455 408 aaKnown RBP eCLIP15.85■□□□□ 0.13
SLIRP-210ENST00000557431 MYBP10242 640 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 HOXB8P17481 243 aaPredicted RBP15.85■□□□□ 0.13
SLIRP-210ENST00000557431 PDIA3P30101 505 aaKnown RBP15.85■□□□□ 0.13
SLIRP-210ENST00000557431 HSPA4P34932 840 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 JAK3P52333 1124 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 TPRNQ4KMQ1 711 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 MCTP2Q6DN12 878 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 CES5AQ6NT32 575 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 TMEM105Q8N8V8 129 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 BICD2Q8TD16 824 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 RIT2Q99578 217 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 GCOM2Q9BZD3 368 aaPredicted RBP15.85■□□□□ 0.13
SLIRP-210ENST00000557431 ADAM7Q9H2U9 754 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 TBC1D13Q9NVG8 400 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 NR2E1Q9Y466 385 aa15.85■□□□□ 0.13
SLIRP-210ENST00000557431 MYH15Q9Y2K3 1946 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 DDX11L8A8MPP1 907 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 EOMESO95936 686 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 IFNAR1P17181 557 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 SLC11A1P49279 550 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 ALDH7A1P49419 539 aaKnown RBP15.84■□□□□ 0.13
SLIRP-210ENST00000557431 AFF1P51825 1210 aaKnown RBP15.84■□□□□ 0.13
SLIRP-210ENST00000557431 TMC5Q6UXY8 1006 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 ZNF280BQ86YH2 543 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 ZNF579Q8NAF0 562 aaKnown RBP15.84■□□□□ 0.13
SLIRP-210ENST00000557431 MRPL9Q9BYD2 267 aaKnown RBP15.84■□□□□ 0.13
SLIRP-210ENST00000557431 AGXT2Q9BYV1 514 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 FAM105AQ9NUU6 356 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 DACT1Q9NYF0 836 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 SUCLA2Q9P2R7 463 aaPredicted RBP15.84■□□□□ 0.13
SLIRP-210ENST00000557431 LIMD1Q9UGP4 676 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 SORCS3Q9UPU3 1222 aa15.84■□□□□ 0.13
SLIRP-210ENST00000557431 IGKV6-21A0A0C4DH24 114 aa15.83■□□□□ 0.12
SLIRP-210ENST00000557431 EML1O00423 815 aa15.83■□□□□ 0.12
SLIRP-210ENST00000557431 SLC37A4O43826 429 aa15.83■□□□□ 0.12
SLIRP-210ENST00000557431 GALTP07902 379 aa15.83■□□□□ 0.12
SLIRP-210ENST00000557431 SFNP31947 248 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms