RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SLC16A3O15427 465 aaKnown RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 CHMP2AO43633 222 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 TMEM253P0C7T8 217 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 CCDC172P0C7W6 258 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 LMNB1P20700 586 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 TNFAIP3P21580 790 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 PSMC2P35998 433 aaKnown RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 FMO5P49326 533 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 KLRC3Q07444 240 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 TCP10Q12799 353 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 KIAA1755Q5JYT7 1200 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 RINT1Q6NUQ1 792 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 CRYGNQ8WXF5 182 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 STK33Q9BYT3 514 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 ADAM7Q9H2U9 754 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.441e-8■■■■■ 51.2
SRP54-213ENST00000556994 TTC7AQ9ULT0 858 aaPredicted RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 ZMYM2Q9UBW7 1377 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 UBAP1LF5GYI3 381 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 IFNAR2P48551 515 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 EIF3BP55884 814 aaKnown RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 IKQ13123 557 aaPredicted RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 LLGL1Q15334 1064 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 BMT2Q1RMZ1 405 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 SLFN13Q68D06 897 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 DENND2CQ68D51 928 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 ZDHHC24Q6UX98 284 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 DHX37Q8IY37 1157 aaKnown RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 SLC20A1Q8WUM9 679 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 KRT35Q92764 455 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 SGSM3Q96HU1 749 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 PRMT1Q99873 361 aaKnown RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 FAM129AQ9BZQ8 928 aa12.33□□□□□ -0.44
SRP54-213ENST00000556994 PABPC3Q9H361 631 aaKnown RBP12.33□□□□□ -0.44
SRP54-213ENST00000556994 FOXN3O00409 490 aaPredicted RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 KIAA0391O15091 583 aaKnown RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 TRIM37O94972 964 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 FAM13AO94988 1023 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 FGFR4P22455 802 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 ANXA13P27216 316 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 CCDC38Q502W7 563 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 LACTB2Q53H82 288 aaPredicted RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 HOOK3Q86VS8 718 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 LRRC34Q8IZ02 419 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 ZDHHC14Q8IZN3 488 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 CCDC197Q8NCU1 140 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 NEK9Q8TD19 979 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 ZNF317Q96PQ6 595 aaPredicted RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 CARD9Q9H257 536 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 CNOT10Q9H9A5 744 aaKnown RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 GGT7Q9UJ14 662 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 ALG6Q9Y672 507 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 NCANO14594 1321 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 NRAPQ86VF7 1730 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 GOLGA6L10A0A0M3HER8 536 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 GTPBP10A4D1E9 387 aaKnown RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 RGS16O15492 202 aaPredicted RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 ZNF76P36508 570 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 RPL21P46778 160 aaKnown RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 MAPK7Q13164 816 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 Q4G0T1 1027 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 PREPLQ4J6C6 727 aaPredicted RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 GIMAP7Q8NHV1 300 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 EPS8L3Q8TE67 593 aaKnown RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 ELAC2Q9BQ52 826 aaKnown RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 INTS2Q9H0H0 1204 aaKnown RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
SRP54-213ENST00000556994 VAV3Q9UKW4 847 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
SRP54-213ENST00000556994 CCT8L1PA6NM43 557 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 PPP1R12BO60237 982 aaPredicted RBP12.31□□□□□ -0.44
SRP54-213ENST00000556994 EYA4O95677 639 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 VCAM1P19320 739 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 MMP13P45452 471 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 PPP1R7Q15435 360 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 ZNF746Q6NUN9 644 aaPredicted RBP12.31□□□□□ -0.44
SRP54-213ENST00000556994 HIBCHQ6NVY1 386 aaPredicted RBP12.31□□□□□ -0.44
SRP54-213ENST00000556994 CPNE8Q86YQ8 564 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 ATXN2LQ8WWM7 1075 aaKnown RBP12.31□□□□□ -0.44
SRP54-213ENST00000556994 TBC1D31Q96DN5 1066 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 GLT8D2Q9H1C3 349 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 GRHL1Q9NZI5 618 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 CTTNBP2NLQ9P2B4 639 aa12.31□□□□□ -0.44
SRP54-213ENST00000556994 MCM8Q9UJA3 840 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms