RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TDO2P48775 406 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 ALDH7A1P49419 539 aaKnown RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 MRPS6P82932 125 aaKnown RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 PFKPQ01813 784 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 SLC44A4Q53GD3 710 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 FAM102BQ5T8I3 360 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 STPG1Q5TH74 334 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 TTBK2Q6IQ55 1244 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 PSAPL1Q6NUJ1 521 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 RNF19BQ6ZMZ0 732 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 SLC22A17Q8WUG5 538 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 DNAJB3Q8WWF6 145 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 GATA6Q92908 595 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 TNPO1Q92973 898 aaKnown RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 CLDN23Q96B33 292 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 ZFP42Q96MM3 310 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 STRBPQ96SI9 672 aaKnown RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 DDX23Q9BUQ8 820 aaKnown RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 TMEM117Q9H0C3 514 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 CWH43Q9H720 699 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 PRMT8Q9NR22 394 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-245ENST00000556958 PAG1Q9NWQ8 432 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 IRAK3Q9Y616 596 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 CCDC171Q6TFL3 1326 aa6.68□□□□□ -1.34
ATXN3-245ENST00000556958 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 TSPY2A6NKD2 308 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 SORBS3O60504 671 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 BCAR3O75815 825 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 APPP05067 770 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 MYCLP12524 364 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 GNAT2P19087 354 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 NOVA1P51513 510 aaKnown RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 POLGP54098 1239 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 GPC5P78333 572 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 SNW1Q13573 536 aaKnown RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 NEDD9Q14511 834 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 MLF2Q15773 248 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 QPCTQ16769 361 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 TSSK4Q6SA08 328 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 ABI1Q8IZP0 508 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 NME8Q8N427 588 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 CMASQ8NFW8 434 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 TMEM169Q96HH4 297 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 EMILIN2Q9BXX0 1053 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 RHOBTB2Q9BYZ6 727 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 NACAP1Q9BZK3 213 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 PUS7LQ9H0K6 701 aaKnown RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 ELAC1Q9H777 363 aaKnown RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 WDR6Q9NNW5 1121 aaKnown RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 LTB4R2Q9NPC1 389 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 PXMP2Q9NR77 195 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 RGS18Q9NS28 235 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 TMEM161AQ9NX61 479 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 STK39Q9UEW8 545 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 TUBE1Q9UJT0 475 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 MRPL11Q9Y3B7 192 aaKnown RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 ZFP37Q9Y6Q3 630 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-245ENST00000556958 FRYQ5TBA9 3013 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 PLIN4Q96Q06 1357 aa6.67□□□□□ -1.34
ATXN3-245ENST00000556958 MYH1P12882 1939 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 MBLAC1A4D2B0 266 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 RRN3P2A6NIE6 340 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 ANHXE9PGG2 379 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 GPR182O15218 404 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 IPO8O15397 1037 aaKnown RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 N4BP1O75113 896 aaKnown RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 IFIT2P09913 472 aaKnown RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 CT47B1P0C2W7 299 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 ZNF806P0C7X5 589 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 LAMP2P13473 410 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 UBA1P22314 1058 aaKnown RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 KLRC2P26717 231 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 MMP16P51512 607 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 SP2Q02086 613 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 PPFIA1Q13136 1202 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 USH1GQ495M9 461 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 SLFNL1Q499Z3 407 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 HSP90AB4PQ58FF6 505 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 UTP14CQ5TAP6 766 aaKnown RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 METTL7BQ6UX53 244 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 ZNF852Q6ZMS4 543 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 VSIG10LQ86VR7 867 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 VPS52Q8N1B4 723 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 SLC39A11Q8N1S5 342 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 CLASRPQ8N2M8 674 aaKnown RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 LRRC43Q8N309 656 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 ADAM32Q8TC27 787 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 TBC1D5Q92609 795 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 MYADMQ96S97 322 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 ADAM2Q99965 735 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 IER2Q9BTL4 223 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 SCNM1Q9BWG6 230 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 CELF4Q9BZC1 486 aaKnown RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 MAP3K20Q9NYL2 800 aaKnown RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 WASF3Q9UPY6 502 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 MTF2Q9Y483 593 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-245ENST00000556958 TRPV2Q9Y5S1 764 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms