RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 UBE3AQ05086 875 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 LEXMQ3ZCV2 418 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 TCEAL5Q5H9L2 206 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 TWF2Q6IBS0 349 aaKnown RBP12.05□□□□□ -0.48
XRCC3-216ENST00000556682 EP400NLQ6ZTU2 488 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 CATSPER4Q7RTX7 472 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 SRGAP1Q7Z6B7 1085 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 ECHDC2Q86YB7 292 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 KLHL23Q8NBE8 558 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 RNF169Q8NCN4 708 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 ERMNQ8TAM6 284 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 PRPF31Q8WWY3 499 aaKnown RBP12.05□□□□□ -0.48
XRCC3-216ENST00000556682 RSPH1Q8WYR4 309 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 MTMR9Q96QG7 549 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 ANKEF1Q9NU02 776 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 TYW1Q9NV66 732 aaKnown RBP12.05□□□□□ -0.48
XRCC3-216ENST00000556682 FAM50BQ9Y247 325 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 EYSQ5T1H1 3165 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 PRUNE2Q8WUY3 3088 aa12.05□□□□□ -0.48
XRCC3-216ENST00000556682 SIP14410 1827 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 CSDE1O75534 798 aaKnown RBP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 DGAT1O75907 488 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 ITGB1P05556 798 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 SRGAP2CP0DJJ0 459 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 FGFR1P11362 822 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 XRCC6P12956 609 aaKnown RBP eCLIP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 FGFR4P22455 802 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 MCM2P49736 904 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 RAB27AP51159 221 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 NCBP1Q09161 790 aaKnown RBP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 TFDP1Q14186 410 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 MXD4Q14582 209 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 EMC2Q15006 297 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 PCBP1Q15365 356 aaKnown RBP eCLIP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 NOSTRINQ8IVI9 506 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 THNSL1Q8IYQ7 743 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 LRRC43Q8N309 656 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 SPPL3Q8TCT6 385 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 TMEM143Q96AN5 459 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 PABPC5Q96DU9 382 aaKnown RBP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 MTRQ99707 1265 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 TRAIPQ9BWF2 469 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 MRPL9Q9BYD2 267 aaKnown RBP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 WRAP73Q9P2S5 460 aaPredicted RBP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 PIN4Q9Y237 131 aaKnown RBP12.04□□□□□ -0.48
XRCC3-216ENST00000556682 UNC80Q8N2C7 3258 aa12.04□□□□□ -0.48
XRCC3-216ENST00000556682 OR52Z1P0C646 297 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 PPM1AP35813 382 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 LAMTOR4Q0VGL1 99 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 ZNF174Q15697 407 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 TTC38Q5R3I4 469 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 PDE12Q6L8Q7 609 aaKnown RBP12.03□□□□□ -0.48
XRCC3-216ENST00000556682 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 KSR1Q8IVT5 923 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
XRCC3-216ENST00000556682 POF1BQ8WVV4 589 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 CASD1Q96PB1 797 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 IFT122Q9HBG6 1241 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 TUFT1Q9NNX1 390 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 CLDND1Q9NY35 253 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 EVPLQ92817 2033 aa12.03□□□□□ -0.48
XRCC3-216ENST00000556682 FSD2A1L4K1 749 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 POTEMA6NI47 508 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 WNT7AO00755 349 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 ZBTB39O15060 712 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 FGF18O76093 207 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 CSPG5O95196 566 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 TECP42680 631 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 PHKA2P46019 1235 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 KRT17Q04695 432 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 BMS1Q14692 1282 aaKnown RBP12.02□□□□□ -0.49
XRCC3-216ENST00000556682 HAUS3Q68CZ6 603 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 ZNF598Q86UK7 904 aaKnown RBP12.02□□□□□ -0.49
XRCC3-216ENST00000556682 COLGALT1Q8NBJ5 622 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 RNF149Q8NC42 400 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 PGBD4Q96DM1 585 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 ZNF558Q96NG5 402 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 NACC1Q96RE7 527 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 TMEM60Q9H2L4 133 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 IGFLR1Q9H665 355 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
XRCC3-216ENST00000556682 FAM105AQ9NUU6 356 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
XRCC3-216ENST00000556682 COL4A4P53420 1690 aaPredicted RBP12.01□□□□□ -0.49
XRCC3-216ENST00000556682 ZNF623O75123 536 aa12.01□□□□□ -0.49
XRCC3-216ENST00000556682 ERLIN2O94905 339 aa12.01□□□□□ -0.49
XRCC3-216ENST00000556682 U2AF2P26368 475 aaKnown RBP eCLIP12.01□□□□□ -0.49
XRCC3-216ENST00000556682 AXLP30530 894 aa12.01□□□□□ -0.49
XRCC3-216ENST00000556682 ALDH7A1P49419 539 aaKnown RBP12.01□□□□□ -0.49
XRCC3-216ENST00000556682 PLCB3Q01970 1234 aa12.01□□□□□ -0.49
XRCC3-216ENST00000556682 POU5F1BQ06416 359 aa12.01□□□□□ -0.49
XRCC3-216ENST00000556682 CAMK1Q14012 370 aa12.01□□□□□ -0.49
XRCC3-216ENST00000556682 COL19A1Q14993 1142 aa12.01□□□□□ -0.49
XRCC3-216ENST00000556682 PTCRAQ6ISU1 281 aaPredicted RBP12.01□□□□□ -0.49
XRCC3-216ENST00000556682 KCNT2Q6UVM3 1135 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms