RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 UBE3AQ05086 875 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 ADAM15Q13444 863 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 CTTNQ14247 550 aaKnown RBP11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 EARS2Q5JPH6 523 aaKnown RBP11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 TMEM31Q5JXX7 168 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 PLPP4Q5VZY2 271 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 B3GNT9Q6UX72 402 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 ANO5Q75V66 913 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 OTUD6AQ7L8S5 288 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 CATSPER4Q7RTX7 472 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 KSR1Q8IVT5 923 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 TPH2Q8IWU9 490 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 EXOC8Q8IYI6 725 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 LRRC43Q8N309 656 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 KHSRPQ92945 711 aaKnown RBP eCLIP11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 GTF3C6Q969F1 213 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 DYDC2Q96IM9 177 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 CCDC43Q96MW1 224 aaKnown RBP11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 LXNQ9BS40 222 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 KCNMB3Q9NPA1 279 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 ENTPD7Q9NQZ7 604 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 VAV3Q9UKW4 847 aa11.84□□□□□ -0.51
SPTLC2-205ENST00000556607 ARID2Q68CP9 1835 aa11.83□□□□□ -0.51
SPTLC2-205ENST00000556607 A0A0U1RQF3 1178 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 JAK2O60674 1132 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 TBX10O75333 385 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 STBD1O95210 358 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 EOMESO95936 686 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 SRGAP2CP0DJJ0 459 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 FDPSP14324 419 aaKnown RBP11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 EPHA7Q15375 998 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 CALCRLQ16602 461 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 XKR9Q5GH70 373 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 KCNT2Q6UVM3 1135 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 LRRC55Q6ZSA7 311 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 TMC7Q7Z402 723 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 ZNF410Q86VK4 478 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 NSUN7Q8NE18 718 aaKnown RBP11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 MRPS27Q92552 414 aaKnown RBP11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 HAS1Q92839 578 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 TMEM143Q96AN5 459 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 ZNF558Q96NG5 402 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 CHST12Q9NRB3 414 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 RGL1Q9NZL6 768 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 BARX2Q9UMQ3 279 aaPredicted RBP11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 PCDHA12Q9UN75 941 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 COL4A3BPQ9Y5P4 624 aa11.83□□□□□ -0.52
SPTLC2-205ENST00000556607 IGKV6-21A0A0C4DH24 114 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 BTBD18B2RXH4 712 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 NT5C1B-RDH14C9J2C7 533 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 PI4K2BG5E9Z4 385 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 SEC24BO95487 1268 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 SRGAP2BP0DMP2 458 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 SKIP12755 728 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 ALADP13716 330 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 YWHABP31946 246 aaKnown RBP11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 PPM1AP35813 382 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 RFC5P40937 340 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 TXKP42681 527 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 ALDH7A1P49419 539 aaKnown RBP11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 ERVFC1P60507 584 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 SMAD4Q13485 552 aaKnown RBP11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 COL19A1Q14993 1142 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 CLLU1OSQ5K130 101 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 ADHFE1Q8IWW8 467 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 C4orf19Q8IY42 314 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 DIS3L2Q8IYB7 885 aaKnown RBP11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 EFHBQ8N7U6 833 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 TMEM87AQ8NBN3 555 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 PSPC1Q8WXF1 523 aaKnown RBP11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 LPPQ93052 612 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 CEP89Q96ST8 783 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 MTRQ99707 1265 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 TCF25Q9BQ70 676 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 LRFN3Q9BTN0 628 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 MRPL9Q9BYD2 267 aaKnown RBP11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 ZSWIM4Q9H7M6 989 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 SPG21Q9NZD8 308 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 WRAP73Q9P2S5 460 aaPredicted RBP11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 PRKAG3Q9UGI9 489 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 INPP5FQ9Y2H2 1132 aa11.82□□□□□ -0.52
SPTLC2-205ENST00000556607 NEMFO60524 1076 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 ZC3H11AO75152 810 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 PHKA2P46019 1235 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 RNASELQ05823 741 aaKnown RBP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 ZP2Q05996 745 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 GNL2Q13823 731 aaKnown RBP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 BMS1Q14692 1282 aaKnown RBP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 EMC2Q15006 297 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 SAFBQ15424 915 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 SMAD2Q15796 467 aaKnown RBP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 PDE12Q6L8Q7 609 aaKnown RBP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 LLGL2Q6P1M3 1020 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 TCP11Q8WWU5 503 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 PRPF31Q8WWY3 499 aaKnown RBP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 POP1Q99575 1024 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms