RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RASA3Q14644 834 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 BRDTQ58F21 947 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 EIF2AK1Q9BQI3 630 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 MTMR4Q9NYA4 1195 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 KIF1CO43896 1103 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 MT-ND3P03897 115 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 POLR2BP30876 1174 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 JAMLQ86YT9 394 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 LRRIQ4A6NIV6 560 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 UBAP1LF5GYI3 381 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 PDE2AO00408 941 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 SLC37A4O43826 429 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 PHF2O75151 1096 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 ATP5HO75947 161 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 SKIP12755 728 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 VAMP7P51809 220 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 PRELPP51888 382 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 PEX3P56589 373 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 YWHAEP62258 255 aaKnown RBP16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 FAM81BQ96LP2 452 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 FAM167BQ9BTA0 163 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 SCOCQ9UIL1 159 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 DBR1Q9UK59 544 aaKnown RBP16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 CCT8L1PA6NM43 557 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 FAM196BA6NMK8 535 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 MYBP10242 640 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 PSMC4P43686 418 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 KRT81Q14533 505 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 BSPRYQ5W0U4 402 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 CENPUQ71F23 418 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 MARCH10Q8NA82 808 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 TPCN2Q8NHX9 752 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 LRRC37BQ96QE4 947 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 RPS6KA4O75676 772 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 CACNB3P54284 484 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 CYB5D1Q6P9G0 228 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 SPATA21Q7Z572 469 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 PPP4R1Q8TF05 950 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 ERP44Q9BS26 406 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 NAGPAQ9UK23 515 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 C3P01024 1663 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 SCYL2Q6P3W7 929 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 ARHGAP27Q6ZUM4 889 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 CLEC10AQ8IUN9 316 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 MORC4Q8TE76 937 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 SGSM3Q96HU1 749 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 TUBB6Q9BUF5 446 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 DBNDD1Q9H9R9 158 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 SEL1LQ9UBV2 794 aa16.11■□□□□ 0.17
ARHGEF40-207ENST00000556399 EMSYQ7Z589 1322 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 H0YIN7 160 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 RNF8O76064 485 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 STK10O94804 968 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 KRT17Q04695 432 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 PLCB4Q15147 1175 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 TRPM8Q7Z2W7 1104 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 RAPGEF5Q92565 580 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 SNF8Q96H20 258 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 VCPKMTQ9H867 229 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 RGL1Q9NZL6 768 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 PDHBP11177 359 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 RFX1P22670 979 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 ZNF543Q08ER8 600 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 PADI6Q6TGC4 694 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 RFX6Q8HWS3 928 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 KIAA0895Q8NCT3 520 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 HAUS1Q96CS2 278 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 SAAL1Q96ER3 474 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 TLR10Q9BXR5 811 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 SUFUQ9UMX1 484 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 FLT1P17948 1338 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 H7C0C1 242 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 RPS6KA5O75582 802 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 EYA4O95677 639 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 ATP5OP48047 213 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 DNAJC24Q6P3W2 148 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 TMEM179Q6ZVK1 233 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 TSEN2Q8NCE0 465 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 PYROXD1Q8WU10 500 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 USP15Q9Y4E8 981 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF40-207ENST00000556399 ESRRAP11474 423 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 COPB2P35606 906 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 BASP1P80723 227 aaKnown RBP16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 LONRF1Q17RB8 773 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 BBS9Q3SYG4 887 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 MEI1Q5TIA1 1274 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 RAB3IL1Q8TBN0 382 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 CEP170P1Q96L14 293 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 HSD3B7Q9H2F3 369 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 APEX2Q9UBZ4 518 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 INTUQ9ULD6 942 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 TRPC6Q9Y210 931 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 ARL2BPQ9Y2Y0 163 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 MAD1L1Q9Y6D9 718 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 MON2Q7Z3U7 1717 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 A0A0G2JND7 137 aa16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 EIF4E1BA6NMX2 242 aaKnown RBP16.09■□□□□ 0.17
ARHGEF40-207ENST00000556399 FAM153BP0C7A2 387 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms