RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 DGKDQ16760 1214 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 GPR158Q5T848 1215 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 CCDC62Q6P9F0 684 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 FRMD7Q6ZUT3 714 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 LIMS2Q7Z4I7 341 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 CXorf67Q86X51 503 aaPredicted RBP5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 OR14K1Q8NGZ2 314 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 RPGRQ92834 1020 aaKnown RBP5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 DYDC2Q96IM9 177 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 SCYL1Q96KG9 808 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 GNRHR2Q96P88 292 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 LRRC37BQ96QE4 947 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 NOL10Q9BSC4 688 aaKnown RBP5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 KCMF1Q9P0J7 381 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 SAE1Q9UBE0 346 aaPredicted RBP5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 EDARQ9UNE0 448 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 TSC22D4Q9Y3Q8 395 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 PPP2R3BQ9Y5P8 575 aa5.02□□□□□ -1.61
SUPT16H-206ENST00000556309 MYPNQ86TC9 1320 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 GPR39O43194 453 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 LAMTOR5O43504 91 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 OPHN1O60890 802 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 ULK1O75385 1050 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 HNRNPLP14866 589 aaKnown RBP eCLIP5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 CPEP16870 476 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 MANFP55145 182 aaKnown RBP5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 FAM50AQ14320 339 aaKnown RBP5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 AGBL4Q5VU57 503 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 CRIP3Q6Q6R5 217 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 PLEKHH3Q7Z736 793 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 TGFBRAP1Q8WUH2 860 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 C8orf49Q96NF6 230 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 PPP4R1LQ9P1A2 415 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 USP36Q9P275 1121 aaKnown RBP5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 DENND2AQ9ULE3 1009 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 ATP8A1Q9Y2Q0 1164 aa5.01□□□□□ -1.61
SUPT16H-206ENST00000556309 SHROOM4Q9ULL8 1493 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 A0A0A6YYJ9 748 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 A0A0A6YYK5 440 aaPredicted RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 ST20-MTHFSA0A0A6YYL1 179 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 ANKRD62A6NC57 917 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 CDKN1CP49918 316 aaPredicted RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 SCAND1P57086 179 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 SESN3P58005 492 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 ATP2C1P98194 919 aaPredicted RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 TRIM25Q14258 630 aaKnown RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 ZNF568Q3ZCX4 644 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 ZMAT1Q5H9K5 638 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 USP30Q70CQ3 517 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 EAF2Q96CJ1 260 aaPredicted RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 NEIL1Q96FI4 390 aaPredicted RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 LMF1Q96S06 567 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 SOX7Q9BT81 388 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 PITHD1Q9GZP4 211 aaPredicted RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 OR10A2Q9H208 303 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 C12orf65Q9H3J6 166 aaKnown RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 MCM8Q9UJA3 840 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 NR2E1Q9Y466 385 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 RBM8AQ9Y5S9 174 aaKnown RBP5□□□□□ -1.61
SUPT16H-206ENST00000556309 SLC4A7Q9Y6M7 1214 aa5□□□□□ -1.61
SUPT16H-206ENST00000556309 C2orf78A6NCI8 922 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 NPEPPSL1A6NEC2 478 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 GOLGA8AA7E2F4 631 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 GOLGA8BA8MQT2 603 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 MATN2O00339 956 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 ARHGAP6O43182 974 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 MAFO75444 373 aaPredicted RBP4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 PFKMP08237 780 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 EPHB4P54760 987 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 PITRM1Q5JRX3 1037 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 KLHDC10Q6PID8 442 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 BMP8AQ7Z5Y6 402 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 SPATS2Q86XZ4 545 aaKnown RBP4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 NKD2Q969F2 451 aaPredicted RBP4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 GPATCH3Q96I76 525 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 WDR92Q96MX6 357 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 DPYSL5Q9BPU6 564 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 TRIM8Q9BZR9 551 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 MEGF9Q9H1U4 602 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 POLR3BQ9NW08 1133 aaPredicted RBP4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 C14orf119Q9NWQ9 140 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 SLC5A4Q9NY91 659 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 KCNG1Q9UIX4 513 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 TMPRSS11EQ9UL52 423 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 COL4A3BPQ9Y5P4 624 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 PHLDB1Q86UU1 1377 aa4.99□□□□□ -1.61
SUPT16H-206ENST00000556309 GPR42O15529 346 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 CDK11BP21127 795 aaKnown RBP4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 LGALS4P56470 323 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 RAC3P60763 192 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 PPARAQ07869 468 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 RNF219Q5W0B1 726 aaPredicted RBP4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 GLB1LQ6UWU2 654 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 GAREM2Q75VX8 874 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 LYSMD2Q8IV50 215 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 PRPF38AQ8NAV1 312 aaKnown RBP4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 GAB3Q8WWW8 586 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 AHCYL2Q96HN2 611 aaKnown RBP4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 HIST1H2AHQ96KK5 128 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 RPL10LQ96L21 214 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms