RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 MYBL1P10243 752 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 IZUMO3Q5VZ72 239 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 ZBTB10Q96DT7 871 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 SAMD9LQ8IVG5 1584 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 POLGP54098 1239 aaPredicted RBP18.67■□□□□ 0.58
SYNE3-204ENST00000555759 COASYQ13057 564 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 MORF4L2Q15014 288 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 ARHGEF16Q5VV41 709 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 KIAA2013Q8IYS2 634 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 RSRC2Q7L4I2 434 aaKnown RBP18.67■□□□□ 0.58
SYNE3-204ENST00000555759 TBC1D10CQ8IV04 446 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 ANKRD36BP1Q96IX9 119 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 PICK1Q9NRD5 415 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 CARSP49589 748 aaKnown RBP18.67■□□□□ 0.58
SYNE3-204ENST00000555759 ICA1Q05084 483 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 MAPRE2Q15555 327 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 TRAPPC11Q7Z392 1133 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 RIBC1Q8N443 379 aaPredicted RBP18.67■□□□□ 0.58
SYNE3-204ENST00000555759 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 CCDC134Q9H6E4 229 aa18.67■□□□□ 0.58
SYNE3-204ENST00000555759 MTO1Q9Y2Z2 717 aaKnown RBP18.67■□□□□ 0.58
SYNE3-204ENST00000555759 PDIA2Q13087 525 aaKnown RBP18.66■□□□□ 0.58
SYNE3-204ENST00000555759 ALX1Q15699 326 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 OXER1Q8TDS5 423 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 MS4A14Q96JA4 679 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 FUCA2Q9BTY2 467 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 GCOM2Q9BZD3 368 aaPredicted RBP18.66■□□□□ 0.58
SYNE3-204ENST00000555759 ADAM22Q9P0K1 906 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 STX18Q9P2W9 335 aaKnown RBP18.66■□□□□ 0.58
SYNE3-204ENST00000555759 LRRIQ4A6NIV6 560 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 GYPCP04921 128 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 ARHGDIAP52565 204 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 DPYDQ12882 1025 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 POTEAQ6S8J7 498 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 ADSSL1Q8N142 457 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 DCLK2Q8N568 766 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 KCNK16Q96T55 309 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 NUP85Q9BW27 656 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 CYP26B1Q9NR63 512 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 SUN2Q9UH99 717 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 PALM3A6NDB9 673 aaPredicted RBP18.66■□□□□ 0.58
SYNE3-204ENST00000555759 H3BQF6 201 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 KITP10721 976 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 GHRP10912 638 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 KRT17Q04695 432 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 CERKLQ49MI3 558 aaPredicted RBP18.66■□□□□ 0.58
SYNE3-204ENST00000555759 TRIM67Q6ZTA4 783 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 ZBED8Q8IZ13 594 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 CCNYQ8ND76 341 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 DHX38Q92620 1227 aaKnown RBP18.66■□□□□ 0.58
SYNE3-204ENST00000555759 ADPGKQ9BRR6 497 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 FIS1Q9Y3D6 152 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 L3MBTL1Q9Y468 752 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 GNPATO15228 680 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 RAD51CO43502 376 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 TMEM259Q4ZIN3 620 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 NAALADL2Q58DX5 795 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 OLFML2BQ68BL8 750 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 CYB5R4Q7L1T6 521 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 ATL2Q8NHH9 583 aa18.66■□□□□ 0.58
SYNE3-204ENST00000555759 MEIS1O00470 390 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 ACBD5Q5T8D3 534 aaPredicted RBP18.65■□□□□ 0.58
SYNE3-204ENST00000555759 RCSD1Q6JBY9 416 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 COL23A1Q86Y22 540 aaPredicted RBP18.65■□□□□ 0.58
SYNE3-204ENST00000555759 ENGASEQ8NFI3 743 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 BCORL1Q5H9F3 1711 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 DAB1O75553 588 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 PRLRP16471 622 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 LAMB3Q13751 1172 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 NAIF1Q69YI7 327 aaPredicted RBP18.65■□□□□ 0.58
SYNE3-204ENST00000555759 NRBP2Q9NSY0 501 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 CDC27P30260 824 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 PAPOLAP51003 745 aaKnown RBP18.65■□□□□ 0.58
SYNE3-204ENST00000555759 KNOP1Q1ED39 458 aaKnown RBP18.65■□□□□ 0.58
SYNE3-204ENST00000555759 CEP55Q53EZ4 464 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 USP38Q8NB14 1042 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 HEMGNQ9BXL5 484 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 LRRIQ3A6PVS8 624 aaPredicted RBP18.65■□□□□ 0.58
SYNE3-204ENST00000555759 TSSK1BQ9BXA7 367 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 CYP4F11Q9HBI6 524 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 PIH1D3Q9NQM4 214 aaKnown RBP18.65■□□□□ 0.58
SYNE3-204ENST00000555759 TSC22D4Q9Y3Q8 395 aa18.65■□□□□ 0.58
SYNE3-204ENST00000555759 FRMD5Q7Z6J6 570 aa18.64■□□□□ 0.58
SYNE3-204ENST00000555759 RHOT1Q8IXI2 618 aa18.64■□□□□ 0.58
SYNE3-204ENST00000555759 KIF2BQ8N4N8 673 aa18.64■□□□□ 0.58
SYNE3-204ENST00000555759 LZICQ8WZA0 190 aa18.64■□□□□ 0.58
SYNE3-204ENST00000555759 MTBPQ96DY7 904 aa18.64■□□□□ 0.58
SYNE3-204ENST00000555759 FTLP02792 175 aaPredicted RBP18.64■□□□□ 0.57
SYNE3-204ENST00000555759 ITKQ08881 620 aa18.64■□□□□ 0.57
SYNE3-204ENST00000555759 DRAP1Q14919 205 aaPredicted RBP18.64■□□□□ 0.57
SYNE3-204ENST00000555759 SURF1Q15526 300 aa18.64■□□□□ 0.57
SYNE3-204ENST00000555759 GLG1Q92896 1179 aa18.64■□□□□ 0.57
SYNE3-204ENST00000555759 MED10Q9BTT4 135 aa18.64■□□□□ 0.57
SYNE3-204ENST00000555759 SERPINB2P05120 415 aa18.64■□□□□ 0.57
SYNE3-204ENST00000555759 ATICP31939 592 aa18.64■□□□□ 0.57
SYNE3-204ENST00000555759 TRPC1P48995 793 aa18.64■□□□□ 0.57
SYNE3-204ENST00000555759 EFTUD2Q15029 972 aaKnown RBP eCLIP18.64■□□□□ 0.572e-7■■■■□ 23.5
SYNE3-204ENST00000555759 ERICH1Q86X53 443 aa18.64■□□□□ 0.57
SYNE3-204ENST00000555759 ANGPTL3Q9Y5C1 460 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms