RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 NRP2O60462 931 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 PFKMP08237 780 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 MANFP55145 182 aaKnown RBP5.55□□□□□ -1.52
SCFD1-214ENST00000554819 TBR1Q16650 682 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 LIMS2Q7Z4I7 341 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 TAX1BP1Q86VP1 789 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-214ENST00000554819 ZCRB1Q8TBF4 217 aaKnown RBP5.55□□□□□ -1.52
SCFD1-214ENST00000554819 SAMD11Q96NU1 681 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 LRRC37BQ96QE4 947 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 PTPN18Q99952 460 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 SSBP3Q9BWW4 388 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-214ENST00000554819 MEGF9Q9H1U4 602 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 SLC6A15Q9H2J7 730 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 DNAI1Q9UI46 699 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 USP18Q9UMW8 372 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 OAZ3Q9UMX2 235 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 ARID1BQ8NFD5 2236 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-214ENST00000554819 GOLGA8AA7E2F4 631 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 GOLGA8BA8MQT2 603 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 CDC14BO60729 498 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 POU3F3P20264 500 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-214ENST00000554819 NRG3P56975 720 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 CCDC62Q6P9F0 684 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 DDX42Q86XP3 938 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCFD1-214ENST00000554819 PLA2G15Q8NCC3 412 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 OR14K1Q8NGZ2 314 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 GAB3Q8WWW8 586 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 NELFAQ9H3P2 528 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 TOPORSQ9NS56 1045 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-214ENST00000554819 PPP2R3BQ9Y5P8 575 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 RBM8AQ9Y5S9 174 aaKnown RBP5.54□□□□□ -1.52
SCFD1-214ENST00000554819 PHLDB1Q86UU1 1377 aa5.54□□□□□ -1.52
SCFD1-214ENST00000554819 C2orf78A6NCI8 922 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 GPR42O15529 346 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 RPS19P39019 145 aaKnown RBP5.53□□□□□ -1.52
SCFD1-214ENST00000554819 ADCY7P51828 1080 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 ATP2C1P98194 919 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-214ENST00000554819 HGFACQ04756 655 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 PDCD1Q15116 288 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 FSCN1Q16658 493 aaKnown RBP5.53□□□□□ -1.52
SCFD1-214ENST00000554819 UGT8Q16880 541 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 LHFPL2Q6ZUX7 228 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 TTC9BQ8N6N2 239 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 CHST13Q8NET6 341 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 OR14C36Q8NHC7 312 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 PPP1R14CQ8TAE6 165 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 RABGGTAQ92696 567 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 AHCYL2Q96HN2 611 aaKnown RBP5.53□□□□□ -1.52
SCFD1-214ENST00000554819 LOXL4Q96JB6 756 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 UIMC1Q96RL1 719 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 FAM126AQ9BYI3 521 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-214ENST00000554819 PRSS50Q9UI38 385 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 TMPRSS11EQ9UL52 423 aa5.53□□□□□ -1.52
SCFD1-214ENST00000554819 A0A0A6YYK5 440 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-214ENST00000554819 B8ZZF3 427 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 MATN2O00339 956 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 SLC26A4O43511 780 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 CLEC2LP0C7M8 214 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 HNRNPLP14866 589 aaKnown RBP eCLIP5.52□□□□□ -1.531e-7■□□□□ 8.4
SCFD1-214ENST00000554819 TCIRG1Q13488 830 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 GAGE13Q4V321 117 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 CT83Q5H943 113 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 LMBR1LQ6UX01 489 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 NECAB2Q7Z6G3 386 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 CLEC14AQ86T13 490 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 GLB1L2Q8IW92 636 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 CFHR4Q92496 578 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 RAX2Q96IS3 184 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 GNRHR2Q96P88 292 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 DPYSL5Q9BPU6 564 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 SOX7Q9BT81 388 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 PUS7LQ9H0K6 701 aaKnown RBP5.52□□□□□ -1.53
SCFD1-214ENST00000554819 C14orf93Q9H972 538 aaKnown RBP5.52□□□□□ -1.53
SCFD1-214ENST00000554819 SLC5A4Q9NY91 659 aa5.52□□□□□ -1.53
SCFD1-214ENST00000554819 ZFR2Q9UPR6 939 aaKnown RBP5.52□□□□□ -1.53
SCFD1-214ENST00000554819 ANKRD62A6NC57 917 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 PATE3B3GLJ2 98 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 PRKD3O94806 890 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 JUNP05412 331 aaKnown RBP5.51□□□□□ -1.53
SCFD1-214ENST00000554819 VSIG10L2P0DP72 767 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 MTHFD2P13995 350 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 CDK11BP21127 795 aaKnown RBP5.51□□□□□ -1.53
SCFD1-214ENST00000554819 IBSPP21815 317 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-214ENST00000554819 ENPP1P22413 925 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 KIR2DL3P43628 341 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 SCAND1P57086 179 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 BPIFB4P59827 614 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 AMPD3Q01432 767 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 PPARAQ07869 468 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 SPIDRQ14159 915 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 SPATS1Q496A3 300 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 HS1BP3Q53T59 392 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 PITRM1Q5JRX3 1037 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 KRT40Q6A162 431 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 TCTN3Q6NUS6 607 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 UNC5BQ8IZJ1 945 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 FAM177A1Q8N128 213 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-214ENST00000554819 ANKRD53Q8N9V6 530 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 SHCBP1Q8NEM2 672 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms