RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 ZYXQ15942 572 aaKnown RBP10.29□□□□□ -0.76
SYNE2-213ENST00000554805 QPCTQ16769 361 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 KCNV1Q6PIU1 500 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 CCDC13Q8IYE1 715 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 SEC16BQ96JE7 1060 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 SCLT1Q96NL6 688 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 NYAP2Q9P242 653 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 INTUQ9ULD6 942 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 ZBTB21Q9ULJ3 1066 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 ATAD5Q96QE3 1844 aa10.29□□□□□ -0.76
SYNE2-213ENST00000554805 MYO3BQ8WXR4 1341 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 IGSF9BQ9UPX0 1349 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 A0A0A6YYK5 440 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 H0YGN5 161 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 CAND2O75155 1236 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 VIMP08670 466 aaKnown RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 SREBF1P36956 1147 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 Q4G0T1 1027 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 CBWD6Q4V339 395 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 CBWD3Q5JTY5 395 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 CBWD5Q5RIA9 395 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 MOXD1Q6UVY6 613 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 CNPY4Q8N129 248 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 UBL4BQ8N7F7 174 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 CRAMP1Q96RY5 1269 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 KCNQ5Q9NR82 932 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 NFS1Q9Y697 457 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 MAST2Q6P0Q8 1798 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 FOXN3O00409 490 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 FSBPO95073 299 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 POLD1P28340 1107 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 IFNAR2P48551 515 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 JAM2P57087 298 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 MKRN4PQ13434 485 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 RBM26Q5T8P6 1007 aaKnown RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 SEL1L2Q5TEA6 688 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 CCDC105Q8IYK2 499 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 EIF1ADQ8N9N8 165 aaKnown RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 NEK9Q8TD19 979 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 DYDC1Q8WWB3 177 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 HES6Q96HZ4 224 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 AZI2Q9H6S1 392 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 DNAJC18Q9H819 358 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 MTRF1LQ9UGC7 380 aaKnown RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 PTPN22Q9Y2R2 807 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 AHDC1Q5TGY3 1603 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 K7ENM7 598 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 SPOPO43791 374 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 FTLP02792 175 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 MMP10P09238 476 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 BCRP11274 1271 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 PMS2P54278 862 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 ACTN3Q08043 901 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 SLFN11Q7Z7L1 901 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 JAMLQ86YT9 394 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 RASGEF1CQ8N431 466 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 PRPF38AQ8NAV1 312 aaKnown RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 ERP44Q9BS26 406 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 POLR3CQ9BUI4 534 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 PDGFDQ9GZP0 370 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-213ENST00000554805 CD248Q9HCU0 757 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 KLC4Q9NSK0 619 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 STXBP5LQ9Y2K9 1186 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 SUGT1Q9Y2Z0 365 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 ALG6Q9Y672 507 aa10.28□□□□□ -0.76
SYNE2-213ENST00000554805 TRAPPC3O43617 180 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 NPEPPSP55786 919 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 DPY19L2P1Q6NXN4 242 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 HHIPL2Q6UWX4 724 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 TMEM179Q6ZVK1 233 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 PALB2Q86YC2 1186 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 C1orf131Q8NDD1 294 aaKnown RBP10.27□□□□□ -0.76
SYNE2-213ENST00000554805 SLC20A1Q8WUM9 679 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 LENG9Q96B70 501 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 MBOAT7Q96N66 472 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 ERVK-5Q9HDB9 667 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 AGPAT3Q9NRZ7 376 aa10.27□□□□□ -0.76
SYNE2-213ENST00000554805 DDX60LQ5H9U9 1706 aaKnown RBP10.27□□□□□ -0.76
SYNE2-213ENST00000554805 SHBGP04278 402 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 GCLMP48507 274 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 EIF3BP55884 814 aaKnown RBP10.27□□□□□ -0.77
SYNE2-213ENST00000554805 DDR1Q08345 913 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 PPP2R5EQ16537 467 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 KIAA1755Q5JYT7 1200 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 FBXO25Q8TCJ0 367 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 MGARPQ8TDB4 240 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 C18orf8Q96DM3 657 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 AGPAT1Q99943 283 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 VCPKMTQ9H867 229 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 SLC40A1Q9NP59 571 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 HAUS2Q9NVX0 235 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 APEX2Q9UBZ4 518 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 VAV3Q9UKW4 847 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 GTPBP10A4D1E9 387 aaKnown RBP10.27□□□□□ -0.77
SYNE2-213ENST00000554805 ANKRD62A6NC57 917 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 CCDC169A6NNP5 214 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 SLITRK3O94933 977 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 MMEP08473 750 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 FNTAP49354 379 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms