RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 GAB3Q8WWW8 586 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 MTMR8Q96EF0 704 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 TRIM8Q9BZR9 551 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 OR10A2Q9H208 303 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 JADE2Q9NQC1 790 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 TMPRSS11EQ9UL52 423 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 EDARQ9UNE0 448 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 ZNF536O15090 1300 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 KATNA1O75449 491 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 ENPP1P22413 925 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 PPARAQ07869 468 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 AGBL4Q5VU57 503 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 TTLL10Q6ZVT0 673 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 USP30Q70CQ3 517 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 GFM2Q969S9 779 aaKnown RBP6.9□□□□□ -1.3
SCFD1-211ENST00000554437 TEPSINQ96N21 525 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 HAPLN2Q9GZV7 340 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 KCTD10Q9H3F6 313 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 PRDM12Q9H4Q4 367 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 HOMER2Q9NSB8 354 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 PRSS50Q9UI38 385 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 NR2E1Q9Y466 385 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 SLC4A7Q9Y6M7 1214 aa6.9□□□□□ -1.3
SCFD1-211ENST00000554437 ARHGAP6O43182 974 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 DAPK3O43293 454 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 LAMTOR5O43504 91 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 PRICKLE3O43900 615 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-211ENST00000554437 HNRNPLP14866 589 aaKnown RBP eCLIP6.89□□□□□ -1.313e-7■□□□□ 8.9
SCFD1-211ENST00000554437 XPAP23025 273 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-211ENST00000554437 LGALS4P56470 323 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 ERVK-21P61565 698 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 MTMR1Q13613 665 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 TRIM25Q14258 630 aaKnown RBP6.89□□□□□ -1.31
SCFD1-211ENST00000554437 TBR1Q16650 682 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 MAN2A1Q16706 1144 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.89□□□□□ -1.31
SCFD1-211ENST00000554437 RNF151Q2KHN1 245 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 ZFYVE27Q5T4F4 411 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 OR14C36Q8NHC7 312 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 RSAD2Q8WXG1 361 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 NKD2Q969F2 451 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-211ENST00000554437 MENTQ9BUN1 341 aa6.89□□□□□ -1.31
SCFD1-211ENST00000554437 WASHC2CQ9Y4E1 1318 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 A0A0A6YYK5 440 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 K7ESF4 209 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 NRP2O60462 931 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 CNOT4O95628 575 aaKnown RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 CELA3BP08861 270 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 GPR15P49685 360 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 RAC3P60763 192 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 KLF1Q13351 362 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 LYSMD2Q8IV50 215 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 RPUSD2Q8IZ73 545 aaKnown RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 OR14K1Q8NGZ2 314 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 GCDHQ92947 438 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 SOX7Q9BT81 388 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 QRSL1Q9H0R6 528 aaKnown RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 CCDC8Q9H0W5 538 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 TRHDEQ9UKU6 1024 aa6.88□□□□□ -1.31
SCFD1-211ENST00000554437 RBM8AQ9Y5S9 174 aaKnown RBP6.88□□□□□ -1.31
SCFD1-211ENST00000554437 FSBPO95073 299 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 GPR3P46089 330 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 EPHB4P54760 987 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 NRG3P56975 720 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 SPIDRQ14159 915 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 CCDC178Q5BJE1 867 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 SYDE2Q5VT97 1194 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 GAREM2Q75VX8 874 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 LPPQ93052 612 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 LRRC37BQ96QE4 947 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 LMF1Q96S06 567 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 OSBPL6Q9BZF3 934 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 C12orf65Q9H3J6 166 aaKnown RBP6.87□□□□□ -1.31
SCFD1-211ENST00000554437 DNAJC28Q9NX36 388 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 RTEL1Q9NZ71 1219 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 DPP7Q9UHL4 492 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 CTDP1Q9Y5B0 961 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-211ENST00000554437 CDY2AQ9Y6F7 541 aa6.87□□□□□ -1.31
SCFD1-211ENST00000554437 C2orf78A6NCI8 922 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 PLATP00750 562 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 CDK17Q00537 523 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 MGAT5Q09328 741 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 NFYCQ13952 458 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 NFIXQ14938 502 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 TBC1D10BQ4KMP7 808 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-211ENST00000554437 TOR2AQ5JU69 321 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 PGM2L1Q6PCE3 622 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 LMBR1LQ6UX01 489 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 CLEC14AQ86T13 490 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 SLC41A1Q8IVJ1 513 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 AMOTL1Q8IY63 956 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 PLA2G15Q8NCC3 412 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 SLC7A6OSQ96CW6 309 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-211ENST00000554437 NEIL1Q96FI4 390 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-211ENST00000554437 C20orf173Q96LM9 149 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 UIMC1Q96RL1 719 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms