RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FILIP1Q7Z7B0 1213 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 ELOA2Q8IYF1 753 aaPredicted RBP6.72□□□□□ -1.33
VPS33B-203ENST00000554264 SLC17A8Q8NDX2 589 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 BRI3BPQ8WY22 251 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 MRPS27Q92552 414 aaKnown RBP6.72□□□□□ -1.33
VPS33B-203ENST00000554264 DPF3Q92784 378 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 OPTNQ96CV9 577 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 GPRASP2Q96D09 838 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 CHAMP1Q96JM3 812 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 CCDC74BQ96LY2 380 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 TIGD1Q96MW7 591 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 EFR3BQ9Y2G0 817 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 PHLPP2Q6ZVD8 1323 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 MKI67P46013 3256 aaKnown RBP6.72□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF646O15015 1829 aaPredicted RBP6.71□□□□□ -1.33
VPS33B-203ENST00000554264 HTTP42858 3142 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CCL15-CCL14A0A0B4J2E2 113 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 MEIS3P2A8K0S8 358 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 F8W031 263 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 RGS13O14921 159 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 TLR2O60603 784 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 MAP4K4O95819 1239 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 WNT11O96014 354 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 IGKV5-2P06315 115 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 ZFYP08048 801 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 ACRP10323 421 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 IL1R1P14778 569 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 KLRK1P26718 216 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 RBM5P52756 815 aaKnown RBP eCLIP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 LACTBP83111 547 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CBX1P83916 185 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CHRNDQ07001 517 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 TUBB2AQ13885 445 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CCL15Q16663 113 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 RABL6Q3YEC7 729 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 TEX35Q5T0J7 233 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 JAKMIP3Q5VZ66 844 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CCDC81Q6ZN84 652 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CCAR1Q8IX12 1150 aaKnown RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 PHACTR4Q8IZ21 702 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CCAR2Q8N163 923 aaKnown RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CERS5Q8N5B7 392 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CACTINQ8WUQ7 758 aaKnown RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 TMEM40Q8WWA1 233 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 BRF1Q92994 677 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 PRMT6Q96LA8 375 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 C16orf45Q96MC5 204 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 HAUS7Q99871 368 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 HTATIP2Q9BUP3 242 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 TUBB2BQ9BVA1 445 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 PLA2G12BQ9BX93 195 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 L2HGDHQ9H9P8 463 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 ZCCHC17Q9NP64 241 aaKnown RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 PAK6Q9NQU5 681 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 RTEL1Q9NZ71 1219 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 CALCOCO1Q9P1Z2 691 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 HOOK1Q9UJC3 728 aaKnown RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 ST14Q9Y5Y6 855 aa6.71□□□□□ -1.34
VPS33B-203ENST00000554264 OAS3Q9Y6K5 1087 aaKnown RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 V9GYY5 206 aaPredicted RBP6.71□□□□□ -1.34
VPS33B-203ENST00000554264 MYH7P12883 1935 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 A0A0D9SFI3 127 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 A0A1W2PPC1 479 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 CCDC69A6NI79 296 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 WASH4PA8MWX3 477 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 AP5Z1O43299 807 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 ZSCAN12O43309 604 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 CDKL5O76039 1030 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 TUBBP07437 444 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 CD8BP10966 210 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 CETPP11597 493 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 NME1P15531 152 aaKnown RBP6.7□□□□□ -1.34
VPS33B-203ENST00000554264 SFPQP23246 707 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS33B-203ENST00000554264 HOXD10P28358 340 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 SOX9P48436 509 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 PRKCQQ04759 706 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 TNK2Q07912 1038 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 GPS2Q13227 327 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 SNW1Q13573 536 aaKnown RBP6.7□□□□□ -1.34
VPS33B-203ENST00000554264 CAMK4Q16566 473 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 ATP2B3Q16720 1220 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 CT47A1Q5JQC4 288 aaPredicted RBP6.7□□□□□ -1.34
VPS33B-203ENST00000554264 RUFY4Q6ZNE9 571 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 ZNF771Q7L3S4 317 aaPredicted RBP6.7□□□□□ -1.34
VPS33B-203ENST00000554264 NLRC3Q7RTR2 1065 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 UBE3BQ7Z3V4 1068 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 CKAP2LQ8IYA6 745 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 NECAB1Q8N987 351 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 KBTBD3Q8NAB2 608 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 ENGASEQ8NFI3 743 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS33B-203ENST00000554264 SH3TC2Q8TF17 1288 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 EAF2Q96CJ1 260 aaPredicted RBP6.7□□□□□ -1.34
VPS33B-203ENST00000554264 DDX11Q96FC9 970 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 CCDC34Q96HJ3 373 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 FAM227BQ96M60 508 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 HSPA12BQ96MM6 686 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 KREMEN1Q96MU8 473 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 SLC9A7Q96T83 725 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 SEMA3GQ9NS98 782 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms