RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 AKT3Q9Y243 479 aa16■□□□□ 0.15
SHMT2-210ENST00000553950 TANC1Q9C0D5 1861 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 BICDL2A1A5D9 508 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 CCDC169A6NNP5 214 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 MYCP01106 439 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-210ENST00000553950 ERCC5P28715 1186 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-210ENST00000553950 PHKA2P46019 1235 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 CLCN3P51790 818 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 HSP90AA2PQ14568 343 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-210ENST00000553950 BMT2Q1RMZ1 405 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 DPCR1Q3MIW9 517 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 MARCH8Q5T0T0 291 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 FOXR2Q6PJQ5 311 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 LRRC71Q8N4P6 559 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 CCDC155Q8N6L0 562 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 SLC43A3Q8NBI5 491 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 KIAA0895Q8NCT3 520 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 TMEM143Q96AN5 459 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-210ENST00000553950 BPIFA3Q9BQP9 254 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 NTPCRQ9BSD7 190 aaKnown RBP15.99■□□□□ 0.15
SHMT2-210ENST00000553950 TMEM206Q9H813 350 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 GPRC5CQ9NQ84 441 aa15.99■□□□□ 0.15
SHMT2-210ENST00000553950 ARVCFO00192 962 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 TLR3O15455 904 aaKnown RBP15.98■□□□□ 0.15
SHMT2-210ENST00000553950 GLRA2P23416 452 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 NPTX2P47972 431 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 LAMTOR4Q0VGL1 99 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 PAK1Q13153 545 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 PTK7Q13308 1070 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 CAPSQ13938 189 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 PCBP1Q15365 356 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHMT2-210ENST00000553950 ANO6Q4KMQ2 910 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 CDCA2Q69YH5 1023 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-210ENST00000553950 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 RPAINQ86UA6 219 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 RHPN2Q8IUC4 686 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 GOLGA5Q8TBA6 731 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 SCLT1Q96NL6 688 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 TSG101Q99816 390 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 SLC39A2Q9NP94 309 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 CGNQ9P2M7 1197 aaKnown RBP15.98■□□□□ 0.15
SHMT2-210ENST00000553950 ARHGAP28Q9P2N2 729 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
SHMT2-210ENST00000553950 KIAA0100Q14667 2235 aaKnown RBP15.98■□□□□ 0.15
SHMT2-210ENST00000553950 SNRPFP62306 86 aaKnown RBP15.97■□□□□ 0.15
SHMT2-210ENST00000553950 TPM4P67936 248 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 LRRC63Q05C16 580 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 STRN3Q13033 797 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 STK4Q13043 487 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 PTGISQ16647 500 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 L1TD1Q5T7N2 865 aaKnown RBP15.97■□□□□ 0.15
SHMT2-210ENST00000553950 GDF6Q6KF10 455 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-210ENST00000553950 ZNF720Q7Z2F6 126 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 SERINC5Q86VE9 423 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 IFNLR1Q8IU57 520 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-210ENST00000553950 ADSSL1Q8N142 457 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 FAM200AQ8TCP9 573 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 ASAP3Q8TDY4 903 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 PRPF31Q8WWY3 499 aaKnown RBP15.97■□□□□ 0.15
SHMT2-210ENST00000553950 NLRP4Q96MN2 994 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 INO80BQ9C086 356 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-210ENST00000553950 TMEM134Q9H6X4 195 aa15.97■□□□□ 0.15
SHMT2-210ENST00000553950 CENPFP49454 3210 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 SFI1A8K8P3 1242 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 SMTNL1A8MU46 457 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 TREHO43280 583 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 PPP1R37O75864 691 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 ZNF165P49910 485 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 GTF2BQ00403 316 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 C1orf53Q5VUE5 145 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 ISM2Q6H9L7 571 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 EPM2AIP1Q7L775 607 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-210ENST00000553950 HS2ST1Q7LGA3 356 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 HAUS6Q7Z4H7 955 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 RNF149Q8NC42 400 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 NLRP7Q8WX94 980 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 ACCSQ96QU6 501 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 FIZ1Q96SL8 496 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 FAM49AQ9H0Q0 323 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-210ENST00000553950 DNAJC25Q9H1X3 360 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 TBC1D7Q9P0N9 293 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 RWDD2AQ9UIY3 292 aa15.96■□□□□ 0.15
SHMT2-210ENST00000553950 DENND3A2RUS2 1198 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 SLC16A4O15374 487 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 FGFR1OPO95684 399 aaKnown RBP15.95■□□□□ 0.14
SHMT2-210ENST00000553950 BMP6P22004 513 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 PRCPP42785 496 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 GPC3P51654 580 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 SOX10P56693 466 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 MYL5Q02045 173 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-210ENST00000553950 MAPK6Q16659 721 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 KNOP1Q1ED39 458 aaKnown RBP15.95■□□□□ 0.14
SHMT2-210ENST00000553950 SRGAP1Q7Z6B7 1085 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 MAP4K3Q8IVH8 894 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 SMYD4Q8IYR2 804 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-210ENST00000553950 KIAA0319LQ8IZA0 1049 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 TMEM161BQ8NDZ6 487 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms