RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 A0A1W2PQ27 194 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 A0A1W2PQ64 194 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 A0A1W2PQD8 194 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 LRRIQ4A6NIV6 560 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 POLR2DO15514 142 aaKnown RBP15.33■□□□□ 0.04
TUBB3-202ENST00000553656 HIP1RO75146 1068 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 TBCAO75347 108 aaKnown RBP15.33■□□□□ 0.04
TUBB3-202ENST00000553656 DARSP14868 501 aaKnown RBP15.33■□□□□ 0.04
TUBB3-202ENST00000553656 GLRA2P23416 452 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 CD52P31358 61 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 KCNJ6P48051 423 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 RAD51AP2Q09MP3 1159 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 DMP1Q13316 513 aaPredicted RBP15.33■□□□□ 0.04
TUBB3-202ENST00000553656 FAM43BQ6ZT52 329 aaPredicted RBP15.33■□□□□ 0.04
TUBB3-202ENST00000553656 C1orf186Q6ZWK4 172 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 SRGAP1Q7Z6B7 1085 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 ZBTB8OSQ8IWT0 167 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 TDHQ8IZJ6 230 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 FSIP1Q8NA03 581 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 DEPTORQ8TB45 409 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 TMEM40Q8WWA1 233 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
TUBB3-202ENST00000553656 FTHL17Q9BXU8 183 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 LRRC27Q9C0I9 530 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 CDHR5Q9HBB8 845 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 KCNG1Q9UIX4 513 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 PADI3Q9ULW8 664 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 TCHHQ07283 1943 aa15.33■□□□□ 0.04
TUBB3-202ENST00000553656 A0A087X0B3 334 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 FAM13AO94988 1023 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 PFKFB1P16118 471 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 NAMPTP43490 491 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 AMPD3Q01432 767 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 CAPSQ13938 189 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 SHHQ15465 462 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 C16orf59Q7L2K0 433 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 CEP57L1Q8IYX8 460 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 HERVK_113Q902F9 699 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 C2orf40Q9H1Z8 148 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 ZHX3Q9H4I2 956 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 AGO3Q9H9G7 860 aaKnown RBP15.32■□□□□ 0.04
TUBB3-202ENST00000553656 C17orf75Q9HAS0 396 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 MAGEF1Q9HAY2 307 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 ODF2LQ9ULJ1 636 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 ST3GAL5Q9UNP4 418 aa15.32■□□□□ 0.04
TUBB3-202ENST00000553656 NOC2LQ9Y3T9 749 aaKnown RBP15.32■□□□□ 0.04
TUBB3-202ENST00000553656 SIP14410 1827 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 A0A1B0GVL5 298 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 A0A1W2PPC1 479 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 INO80B-WBP1J3KQ70 363 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 ERLIN2O94905 339 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 SYKP43405 635 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 POU5F1BQ06416 359 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 NCBP1Q09161 790 aaKnown RBP15.31■□□□□ 0.04
TUBB3-202ENST00000553656 NAALADL2Q58DX5 795 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 CATSPER4Q7RTX7 472 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 FAM228AQ86W67 206 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 LRRC15Q8TF66 581 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 CCDC34Q96HJ3 373 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 REEP2Q9BRK0 252 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 OSBPL7Q9BZF2 842 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 TNMDQ9H2S6 317 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 ERVK-5Q9HDB9 667 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 LARSQ9P2J5 1176 aaKnown RBP15.31■□□□□ 0.04
TUBB3-202ENST00000553656 USP25Q9UHP3 1055 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 COLQQ9Y215 455 aaPredicted RBP15.31■□□□□ 0.04
TUBB3-202ENST00000553656 SLC4A7Q9Y6M7 1214 aa15.31■□□□□ 0.04
TUBB3-202ENST00000553656 NPHP3-ACAD11A0A0J9YXS1 232 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 DENND3A2RUS2 1198 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 AMHP03971 560 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 ZSCAN20P17040 1043 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-202ENST00000553656 SMTNP53814 917 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 PEX3P56589 373 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 PTENP60484 403 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-202ENST00000553656 PCBP1Q15365 356 aaKnown RBP eCLIP15.3■□□□□ 0.04
TUBB3-202ENST00000553656 ARSHQ5FYA8 562 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 VWCEQ96DN2 955 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 GBP4Q96PP9 640 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 NFKBIZQ9BYH8 718 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 PRO3102Q9H379 93 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 IFT122Q9HBG6 1241 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 POLD4Q9HCU8 107 aa15.3■□□□□ 0.04
TUBB3-202ENST00000553656 PHLPP2Q6ZVD8 1323 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
TUBB3-202ENST00000553656 PLS3P13797 630 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 FGFR4P22455 802 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 NDUFA8P51970 172 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 EFNA5P52803 228 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 E2F4Q16254 413 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 DYMQ7RTS9 669 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 IFNLR1Q8IU57 520 aaPredicted RBP15.29■□□□□ 0.04
TUBB3-202ENST00000553656 DAW1Q8N136 415 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 BSNDQ8WZ55 320 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 DDX12PQ92771 950 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 SLC9A7Q96T83 725 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 PARVGQ9HBI0 331 aa15.29■□□□□ 0.04
TUBB3-202ENST00000553656 KMT5AQ9NQR1 393 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms