RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CSTF1Q05048 431 aaKnown RBP15.72■□□□□ 0.11
PRPF39-204ENST00000553605 TRDNQ13061 729 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 ITGB3BPQ13352 177 aaPredicted RBP15.72■□□□□ 0.11
PRPF39-204ENST00000553605 WTAPQ15007 396 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 PDXDC2PQ6P474 469 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 ABHD15Q6UXT9 468 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 CYP26C1Q6V0L0 522 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 CATIPQ7Z7H3 387 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 SHDQ96IW2 340 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 BCO2Q9BYV7 579 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 SLC2A4RGQ9NR83 387 aa15.72■□□□□ 0.11
PRPF39-204ENST00000553605 SMG5Q9UPR3 1016 aaKnown RBP15.72■□□□□ 0.11
PRPF39-204ENST00000553605 CLUHO75153 1309 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 CCNE2O96020 404 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 PPM1JQ5JR12 505 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 CCDC60Q8IWA6 550 aaPredicted RBP15.71■□□□□ 0.11
PRPF39-204ENST00000553605 ZBTB44Q8NCP5 570 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 RSPH1Q8WYR4 309 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 VN1R3Q9BXE9 311 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 EPC1Q9H2F5 836 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 ADAMTS10Q9H324 1103 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 NRDE2Q9H7Z3 1164 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 AGO4Q9HCK5 861 aaKnown RBP15.71■□□□□ 0.11
PRPF39-204ENST00000553605 ZNF302Q9NR11 478 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 MAN1C1Q9NR34 630 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 DACT1Q9NYF0 836 aa15.71■□□□□ 0.11
PRPF39-204ENST00000553605 LILRB3O75022 631 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 SSBP05455 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
PRPF39-204ENST00000553605 LAMP2P13473 410 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 ATP4AP20648 1035 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 SMARCA1P28370 1054 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 COL9A3Q14050 684 aaPredicted RBP15.7■□□□□ 0.1
PRPF39-204ENST00000553605 SWSAP1Q6NVH7 229 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 CKAP2LQ8IYA6 745 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 RHOBTB2Q9BYZ6 727 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 ZSCAN32Q9NX65 697 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 STK39Q9UEW8 545 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 AKT3Q9Y243 479 aa15.7■□□□□ 0.1
PRPF39-204ENST00000553605 KANSL1LA0AUZ9 987 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 ANHXE9PGG2 379 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 DDX39AO00148 427 aaKnown RBP15.69■□□□□ 0.1
PRPF39-204ENST00000553605 INPPL1O15357 1258 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 TBC1D4O60343 1298 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 KIF5BP33176 963 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 CLCN3P51790 818 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 RNASELQ05823 741 aaKnown RBP15.69■□□□□ 0.1
PRPF39-204ENST00000553605 ELMSAN1Q6PJG2 1045 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 TRMT1LQ7Z2T5 733 aaKnown RBP15.69■□□□□ 0.1
PRPF39-204ENST00000553605 ZNF710Q8N1W2 664 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 BBXQ8WY36 941 aaPredicted RBP15.69■□□□□ 0.1
PRPF39-204ENST00000553605 ZNF668Q96K58 619 aaPredicted RBP15.69■□□□□ 0.1
PRPF39-204ENST00000553605 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 PARD6AQ9NPB6 346 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 MRPL17Q9NRX2 175 aaKnown RBP15.69■□□□□ 0.1
PRPF39-204ENST00000553605 TBC1D13Q9NVG8 400 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.69■□□□□ 0.1
PRPF39-204ENST00000553605 DNAJB4Q9UDY4 337 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 DPP7Q9UHL4 492 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 ATRXP46100 2492 aa15.69■□□□□ 0.1
PRPF39-204ENST00000553605 MAGEB2O15479 319 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 LILRB5O75023 590 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 FGFR4P22455 802 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 TMOD1P28289 359 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 SLC11A1P49279 550 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 SNW1Q13573 536 aaKnown RBP15.68■□□□□ 0.1
PRPF39-204ENST00000553605 HTR4Q13639 388 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 SART3Q15020 963 aaKnown RBP15.68■□□□□ 0.1
PRPF39-204ENST00000553605 CEP55Q53EZ4 464 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 NOMO2Q5JPE7 1267 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 MIS18BP1Q6P0N0 1132 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 ST13P5Q8NFI4 369 aaPredicted RBP15.68■□□□□ 0.1
PRPF39-204ENST00000553605 CTCFLQ8NI51 663 aaPredicted RBP15.68■□□□□ 0.1
PRPF39-204ENST00000553605 SMG7Q92540 1137 aaKnown RBP15.68■□□□□ 0.1
PRPF39-204ENST00000553605 MAP3K14Q99558 947 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 LZTS2Q9BRK4 669 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 GBP3Q9H0R5 595 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 GMEB2Q9UKD1 530 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 CEP131Q9UPN4 1083 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 NUMBLQ9Y6R0 609 aa15.68■□□□□ 0.1
PRPF39-204ENST00000553605 SLC30A4O14863 429 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 RFPL2O75678 378 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 MYBP10242 640 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 DARSP14868 501 aaKnown RBP15.67■□□□□ 0.1
PRPF39-204ENST00000553605 PHKA2P46019 1235 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 GPC5P78333 572 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 DMWDQ09019 674 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 LONRF3Q496Y0 759 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 GLB1LQ6UWU2 654 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 NELL1Q92832 810 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 LPPQ93052 612 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 DDX23Q9BUQ8 820 aaKnown RBP15.67■□□□□ 0.1
PRPF39-204ENST00000553605 OSBPL6Q9BZF3 934 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 PIDD1Q9HB75 910 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 CHST12Q9NRB3 414 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
PRPF39-204ENST00000553605 MTF2Q9Y483 593 aaPredicted RBP15.67■□□□□ 0.1
PRPF39-204ENST00000553605 FAM170BA6NMN3 283 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms