RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 RAD54LQ92698 747 aa7.97□□□□□ -1.13
BEST3-212ENST00000553096 CENPTQ96BT3 561 aa7.97□□□□□ -1.13
BEST3-212ENST00000553096 GMLQ99445 158 aa7.97□□□□□ -1.13
BEST3-212ENST00000553096 LSM14BQ9BX40 385 aaKnown RBP7.97□□□□□ -1.13
BEST3-212ENST00000553096 KANSL2Q9H9L4 492 aa7.97□□□□□ -1.13
BEST3-212ENST00000553096 FAM114A2Q9NRY5 505 aa7.97□□□□□ -1.13
BEST3-212ENST00000553096 DDX20Q9UHI6 824 aaKnown RBP7.97□□□□□ -1.13
BEST3-212ENST00000553096 ODF2LQ9ULJ1 636 aa7.97□□□□□ -1.13
BEST3-212ENST00000553096 COL11A1P12107 1806 aaPredicted RBP7.97□□□□□ -1.13
BEST3-212ENST00000553096 ZSCAN5CA6NGD5 496 aaPredicted RBP7.96□□□□□ -1.13
BEST3-212ENST00000553096 H0YGN5 161 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 GH2P01242 217 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 MRPL12P52815 198 aaKnown RBP7.96□□□□□ -1.13
BEST3-212ENST00000553096 ZNF844Q08AG5 666 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 IRF5Q13568 498 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 CLUL1Q15846 466 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 ABCB5Q2M3G0 1257 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 KRT79Q5XKE5 535 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 TMEM179Q6ZVK1 233 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 HOOK3Q86VS8 718 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 KLHL7Q8IXQ5 586 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 SYCE1Q8N0S2 351 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 GMCL1P1Q8NEA9 526 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 TBC1D5Q92609 795 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 SEC16BQ96JE7 1060 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.96□□□□□ -1.13
BEST3-212ENST00000553096 IRF2BPLQ9H1B7 796 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 CENPHQ9H3R5 247 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 PSTPIP2Q9H939 334 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 CD248Q9HCU0 757 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 BMP2KQ9NSY1 1161 aaPredicted RBP7.96□□□□□ -1.13
BEST3-212ENST00000553096 DDX25Q9UHL0 483 aaKnown RBP7.96□□□□□ -1.13
BEST3-212ENST00000553096 NFS1Q9Y697 457 aa7.96□□□□□ -1.13
BEST3-212ENST00000553096 PHIPQ8WWQ0 1821 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 SPDYE2BA6NHP3 402 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 F5H6K3 240 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 KCNK3O14649 394 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 SLC26A4O43511 780 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 FAM200BP0CF97 657 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 SPDYE6P0CI01 402 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 EPS15P42566 896 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 ECE1P42892 770 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 RPS6KA3P51812 740 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 POLR2FP61218 127 aaKnown RBP7.96□□□□□ -1.14
BEST3-212ENST00000553096 ERVK-9P63128 1117 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 KLRC3Q07444 240 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 XRCC4Q13426 336 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 RAPGEF1Q13905 1077 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 PPP4R3CPQ6ZMV5 832 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 RPUSD2Q8IZ73 545 aaKnown RBP7.96□□□□□ -1.14
BEST3-212ENST00000553096 FUKQ8N0W3 1084 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 ANKS4BQ8N8V4 417 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.96□□□□□ -1.14
BEST3-212ENST00000553096 NLRC4Q9NPP4 1024 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 ZNF277Q9NRM2 450 aaPredicted RBP7.96□□□□□ -1.14
BEST3-212ENST00000553096 RABL2BQ9UNT1 228 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 A0A1B0GUA9 196 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 CLRN2A0PK11 232 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 TCP10L2B9ZVM9 353 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 TLR2O60603 784 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 ENTPD3O75355 529 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 RAD17O75943 681 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 GSTA1P08263 222 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 GCFC2P16383 781 aaKnown RBP7.96□□□□□ -1.14
BEST3-212ENST00000553096 ZCWPW2Q504Y3 356 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 CPLX4Q7Z7G2 160 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 VPS36Q86VN1 386 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 CACTIN-AS1Q8N1I8 211 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 ZNF483Q8TF39 744 aaPredicted RBP7.96□□□□□ -1.14
BEST3-212ENST00000553096 UBLCP1Q8WVY7 318 aaPredicted RBP7.96□□□□□ -1.14
BEST3-212ENST00000553096 GMCL1Q96IK5 515 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 MBOAT7Q96N66 472 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 CSRNP1Q96S65 589 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 FGFBP2Q9BYJ0 223 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 ANO3Q9BYT9 981 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 ATP6V0A4Q9HBG4 840 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 TMEM165Q9HC07 324 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 KCNMB3Q9NPA1 279 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 G3BP2Q9UN86 482 aaKnown RBP7.96□□□□□ -1.14
BEST3-212ENST00000553096 DIS3Q9Y2L1 958 aaKnown RBP7.96□□□□□ -1.14
BEST3-212ENST00000553096 PCDHA1Q9Y5I3 950 aa7.96□□□□□ -1.14
BEST3-212ENST00000553096 LOXHD1Q8IVV2 1947 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 A0A0A6YYK5 440 aaPredicted RBP7.95□□□□□ -1.14
BEST3-212ENST00000553096 TRAF5O00463 557 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 CEP104O60308 925 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 NOL4O94818 638 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 ECHS1P30084 290 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 STAT3P40763 770 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 RWDD2BP57060 319 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 SPIRE1Q08AE8 756 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 CRYMQ14894 314 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 RSBN1LQ6PCB5 846 aaPredicted RBP7.95□□□□□ -1.14
BEST3-212ENST00000553096 TRIM59Q8IWR1 403 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 SNX29Q8TEQ0 813 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 LENG9Q96B70 501 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 RAB17Q9H0T7 212 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 LMCD1Q9NZU5 365 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 PIM2Q9P1W9 311 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 PGAP2Q9UHJ9 254 aa7.95□□□□□ -1.14
BEST3-212ENST00000553096 INTUQ9ULD6 942 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms