RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.57
NEK3-203ENST00000551355 HOXC8P31273 242 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 ACLYP53396 1101 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 IGBP1P78318 339 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 GTF2BQ00403 316 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 IQCB1Q15051 598 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 TPD52L1Q16890 204 aaPredicted RBP11.46□□□□□ -0.57
NEK3-203ENST00000551355 KNOP1Q1ED39 458 aaKnown RBP11.46□□□□□ -0.57
NEK3-203ENST00000551355 KLHL10Q6JEL2 608 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 TAF2Q6P1X5 1199 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 HAUS6Q7Z4H7 955 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 SMYD4Q8IYR2 804 aaPredicted RBP11.46□□□□□ -0.57
NEK3-203ENST00000551355 NME8Q8N427 588 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 METTL13Q8N6R0 699 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 DEPTORQ8TB45 409 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 SCFD1Q8WVM8 642 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 LMBR1Q8WVP7 490 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 PRPF31Q8WWY3 499 aaKnown RBP11.46□□□□□ -0.57
NEK3-203ENST00000551355 TMEM143Q96AN5 459 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 ARMC5Q96C12 935 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 GLT1D1Q96MS3 346 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 ACCSQ96QU6 501 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 FIZ1Q96SL8 496 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 STRA6Q9BX79 667 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 NFKBIZQ9BYH8 718 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 RBSNQ9H1K0 784 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 GPRC5CQ9NQ84 441 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 TBC1D7Q9P0N9 293 aa11.46□□□□□ -0.57
NEK3-203ENST00000551355 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.57
NEK3-203ENST00000551355 DNM1LO00429 736 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 CALUO43852 315 aaPredicted RBP11.45□□□□□ -0.58
NEK3-203ENST00000551355 PPP1R37O75864 691 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 CCL5P13501 91 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 GLRA2P23416 452 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 RPL13P26373 211 aaKnown RBP11.45□□□□□ -0.58
NEK3-203ENST00000551355 ADAM17P78536 824 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 LAMTOR4Q0VGL1 99 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 STRN3Q13033 797 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 MYBPC2Q14324 1141 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 PCBP1Q15365 356 aaKnown RBP eCLIP11.45□□□□□ -0.58
NEK3-203ENST00000551355 NFIL3Q16649 462 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 EDRF1Q3B7T1 1238 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 MARCH8Q5T0T0 291 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 HS2ST1Q7LGA3 356 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 RSPH3Q86UC2 560 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 ZNF410Q86VK4 478 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 FAM114A1Q8IWE2 563 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 ZBTB8OSQ8IWT0 167 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 DHX40Q8IX18 779 aaKnown RBP11.45□□□□□ -0.58
NEK3-203ENST00000551355 AOPEPQ8N6M6 819 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 LINC01465Q8N7H1 131 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 RNF214Q8ND24 703 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 TMEM161BQ8NDZ6 487 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 TMEM174Q8WUU8 243 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 HPS3Q969F9 1004 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 RNF208Q9H0X6 261 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 UNC93B1Q9H1C4 597 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 GRPEL1Q9HAV7 217 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 PRDM10Q9NQV6 1147 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
NEK3-203ENST00000551355 SETD4Q9NVD3 440 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 ARHGAP28Q9P2N2 729 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 GTF2IRD1Q9UHL9 959 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 OGDHLQ9ULD0 1010 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 PHF24Q9UPV7 400 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 MAPK8IP1Q9UQF2 711 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 TRAF3IP3Q9Y228 551 aa11.45□□□□□ -0.58
NEK3-203ENST00000551355 LRRIQ4A6NIV6 560 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 K7ERI5 159 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 SLC16A4O15374 487 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 GNA14O95837 355 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 MYBP10242 640 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
NEK3-203ENST00000551355 NMT1P30419 496 aaKnown RBP11.44□□□□□ -0.58
NEK3-203ENST00000551355 PHKA2P46019 1235 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 CHMP4BP1P59074 171 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 FKBP3Q00688 224 aaKnown RBP11.44□□□□□ -0.58
NEK3-203ENST00000551355 SPAG1Q07617 926 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
NEK3-203ENST00000551355 NBPF20Q3BBV1 942 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 TTI2Q6NXR4 508 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 LUZP1Q86V48 1076 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 RHPN2Q8IUC4 686 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 SYCP3Q8IZU3 236 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 LRRC71Q8N4P6 559 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 ANKRD20A12PQ8NF67 263 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 TRAPPC12Q8WVT3 735 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 ANP32BQ92688 251 aaKnown RBP11.44□□□□□ -0.58
NEK3-203ENST00000551355 VTI1AQ96AJ9 217 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 ZNF333Q96JL9 665 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 GBP3Q9H0R5 595 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 KCTD10Q9H3F6 313 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 THAP9Q9H5L6 903 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 HDAC6Q9UBN7 1215 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 TBX20Q9UMR3 447 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 AKT3Q9Y243 479 aa11.44□□□□□ -0.58
NEK3-203ENST00000551355 NFE2L3Q9Y4A8 694 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms