RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 FRMPD2Q68DX3 1309 aaPredicted RBP6.72□□□□□ -1.33
CPSF6-206ENST00000550987 VIRMAQ69YN4 1812 aaKnown RBP6.71□□□□□ -1.33
CPSF6-206ENST00000550987 MST1RQ04912 1400 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 AP1G1O43747 822 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 NRDCO43847 1150 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 CTNND1O60716 968 aaKnown RBP6.71□□□□□ -1.34
CPSF6-206ENST00000550987 TADA3O75528 432 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 TMEM253P0C7T8 217 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 MSL3P1P0C860 447 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 ENPP1P22413 925 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 FNTBP49356 437 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 PURAQ00577 322 aaKnown RBP6.71□□□□□ -1.34
CPSF6-206ENST00000550987 RASSF7Q02833 373 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 GRIN1Q05586 938 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 PICALMQ13492 652 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 SAFB2Q14151 953 aaKnown RBP eCLIP6.71□□□□□ -1.34
CPSF6-206ENST00000550987 CT83Q5H943 113 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 EMC4Q5J8M3 183 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 EPM2AIP1Q7L775 607 aaPredicted RBP6.71□□□□□ -1.34
CPSF6-206ENST00000550987 PHYKPLQ8IUZ5 450 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 HIPK4Q8NE63 616 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 PDZD8Q8NEN9 1154 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 JADE3Q92613 823 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 FERMT2Q96AC1 680 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 E2F7Q96AV8 911 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 TIFAQ96CG3 184 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 AIFM3Q96NN9 605 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 GBP4Q96PP9 640 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 TUBGCP5Q96RT8 1024 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 MCOLN1Q9GZU1 580 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 ASH2LQ9UBL3 628 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 NUDT5Q9UKK9 219 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 EDARQ9UNE0 448 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 GPR45Q9Y5Y3 372 aa6.71□□□□□ -1.34
CPSF6-206ENST00000550987 FITM1A5D6W6 292 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 OFD1O75665 1012 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 IFIT2P09913 472 aaKnown RBP6.7□□□□□ -1.34
CPSF6-206ENST00000550987 CLEC2LP0C7M8 214 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 CD8BP10966 210 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 LPOP22079 712 aaPredicted RBP6.7□□□□□ -1.34
CPSF6-206ENST00000550987 AKAP5P24588 427 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 SDHAP31040 664 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 SLC6A11P48066 632 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 EPHA5P54756 1037 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 SRSF2Q01130 221 aaKnown RBP6.7□□□□□ -1.34
CPSF6-206ENST00000550987 FSCN1Q16658 493 aaKnown RBP6.7□□□□□ -1.34
CPSF6-206ENST00000550987 COBLL1Q53SF7 1204 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 RRP12Q5JTH9 1297 aaKnown RBP6.7□□□□□ -1.34
CPSF6-206ENST00000550987 CCDC62Q6P9F0 684 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 SAMD3Q8N6K7 520 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 PPM1NQ8N819 430 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 BCL7CQ8WUZ0 217 aaPredicted RBP6.7□□□□□ -1.34
CPSF6-206ENST00000550987 CLEC4DQ8WXI8 215 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 EAF2Q96CJ1 260 aaPredicted RBP6.7□□□□□ -1.34
CPSF6-206ENST00000550987 C19orf44Q9H6X5 657 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 MAN1C1Q9NR34 630 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 FBLN5Q9UBX5 448 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 USP25Q9UHP3 1055 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 PALD1Q9ULE6 856 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 SIT1Q9Y3P8 196 aa6.7□□□□□ -1.34
CPSF6-206ENST00000550987 CARMIL1Q5VZK9 1371 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 PXDNLA1KZ92 1463 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 UBA6A0AVT1 1052 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-206ENST00000550987 TGFB1P01137 390 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 C4BPAP04003 597 aaKnown RBP6.69□□□□□ -1.34
CPSF6-206ENST00000550987 OSMP13725 252 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 MTHFD2P13995 350 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 PLA2G4EQ3MJ16 856 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 CATSPEREQ5SY80 951 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 CXorf67Q86X51 503 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-206ENST00000550987 SIRT2Q8IXJ6 389 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 SSH1Q8WYL5 1049 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 TTC17Q96AE7 1141 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 RAX2Q96IS3 184 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 SLC2A13Q96QE2 648 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 PLCD4Q9BRC7 762 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 POFUT1Q9H488 388 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 RXFP1Q9HBX9 757 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 ANLNQ9NQW6 1124 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 GPR160Q9UJ42 338 aa6.69□□□□□ -1.34
CPSF6-206ENST00000550987 NUP153P49790 1475 aaKnown RBP6.68□□□□□ -1.34
CPSF6-206ENST00000550987 ADGRB3O60242 1522 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 ARHGAP5Q13017 1502 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 ST20-MTHFSA0A0A6YYL1 179 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 SGSM2O43147 1006 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 GDF11O95390 407 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 LDHAP00338 332 aaKnown RBP6.68□□□□□ -1.34
CPSF6-206ENST00000550987 MMEP08473 750 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 TRIM27P14373 513 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 GRM3Q14832 879 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.68□□□□□ -1.34
CPSF6-206ENST00000550987 UAP1L1Q3KQV9 507 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 TTC38Q5R3I4 469 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 INTS5Q6P9B9 1019 aaKnown RBP6.68□□□□□ -1.34
CPSF6-206ENST00000550987 NETO2Q8NC67 525 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 SLC35G2Q8TBE7 412 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 PEX11GQ96HA9 241 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 SARGQ9BW04 601 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms