RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 SERTAD1Q9UHV2 236 aa23.74■■□□□ 1.39
NEK3-202ENST00000550841 A0A087WZ62 844 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 ZNF202O95125 648 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 CXCL10P02778 98 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 GLRA2P23416 452 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 EIF4BP23588 611 aaKnown RBP23.73■■□□□ 1.39
NEK3-202ENST00000550841 PHKA2P46019 1235 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 MDM2Q00987 491 aaPredicted RBP23.73■■□□□ 1.39
NEK3-202ENST00000550841 GIT2Q14161 759 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 KANK3Q6NY19 840 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 TSHZ1Q6ZSZ6 1077 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 SRGAP1Q7Z6B7 1085 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 KSR1Q8IVT5 923 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 TDHQ8IZJ6 230 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 RNF149Q8NC42 400 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 ASAP3Q8TDY4 903 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 DDX12PQ92771 950 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 PPP1R16BQ96T49 567 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 OSMRQ99650 979 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 FDXACB1Q9BRP7 624 aaPredicted RBP23.73■■□□□ 1.39
NEK3-202ENST00000550841 GOLPH3LQ9H4A5 285 aa23.73■■□□□ 1.39
NEK3-202ENST00000550841 LARSQ9P2J5 1176 aaKnown RBP23.73■■□□□ 1.39
NEK3-202ENST00000550841 MYMKA6NI61 221 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 GPR182O15218 404 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 NBNO60934 754 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 TBCAO75347 108 aaKnown RBP23.72■■□□□ 1.39
NEK3-202ENST00000550841 DARSP14868 501 aaKnown RBP23.72■■□□□ 1.39
NEK3-202ENST00000550841 NAMPTP43490 491 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 FAM160A1Q05DH4 1040 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 RAD51AP2Q09MP3 1159 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 LONRF3Q496Y0 759 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 DEFB128Q7Z7B8 93 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 CNNM3Q8NE01 707 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 SEPT8Q92599 483 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 NFKBIZQ9BYH8 718 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 C2orf40Q9H1Z8 148 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 CDHR5Q9HBB8 845 aa23.72■■□□□ 1.39
NEK3-202ENST00000550841 NPHP3-ACAD11A0A0J9YXS1 232 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 ACTN4O43707 911 aaKnown RBP23.71■■□□□ 1.39
NEK3-202ENST00000550841 RPS6KA5O75582 802 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 FAM13AO94988 1023 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 MYL1P05976 194 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 GHRP10912 638 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 PLS3P13797 630 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 SMTNP53814 917 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 DMP1Q13316 513 aaPredicted RBP23.71■■□□□ 1.39
NEK3-202ENST00000550841 LPIN1Q14693 890 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 MBTPS1Q14703 1052 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 PCBP1Q15365 356 aaKnown RBP eCLIP23.71■■□□□ 1.39
NEK3-202ENST00000550841 LRIT3Q3SXY7 679 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 GPR153Q6NV75 609 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 ZBTB8OSQ8IWT0 167 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 FMR1NBQ8N0W7 255 aaPredicted RBP23.71■■□□□ 1.39
NEK3-202ENST00000550841 APBB2Q92870 758 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 C7orf25Q9BPX7 421 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 REEP2Q9BRK0 252 aa23.71■■□□□ 1.39
NEK3-202ENST00000550841 LRRIQ4A6NIV6 560 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 GADD45BO75293 160 aaPredicted RBP23.7■■□□□ 1.38
NEK3-202ENST00000550841 ACTN1P12814 892 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 PTENP60484 403 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 MAPK7Q13164 816 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 CAPSQ13938 189 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 GPNMBQ14956 572 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 PLEKHG4Q58EX7 1191 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 CNNM4Q6P4Q7 775 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 KRBA2Q6ZNG9 492 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 DYMQ7RTS9 669 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 IFNLR1Q8IU57 520 aaPredicted RBP23.7■■□□□ 1.38
NEK3-202ENST00000550841 DAW1Q8N136 415 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 DEPTORQ8TB45 409 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 ZNF668Q96K58 619 aaPredicted RBP23.7■■□□□ 1.38
NEK3-202ENST00000550841 NTPCRQ9BSD7 190 aaKnown RBP23.7■■□□□ 1.38
NEK3-202ENST00000550841 IFT122Q9HBG6 1241 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 PARVGQ9HBI0 331 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 POLD4Q9HCU8 107 aa23.7■■□□□ 1.38
NEK3-202ENST00000550841 PHLPP2Q6ZVD8 1323 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 CCDC169A6NNP5 214 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 SFI1A8K8P3 1242 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 H0YCG3 227 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 FGBP02675 491 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 GAP43P17677 238 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 SCP2P22307 547 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 SFPQP23246 707 aaKnown RBP eCLIP23.69■■□□□ 1.38
NEK3-202ENST00000550841 EFNA5P52803 228 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 PEX3P56589 373 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 PAK2Q13177 524 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 CNKSR3Q6P9H4 555 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 PSRC1Q6PGN9 363 aaPredicted RBP23.69■■□□□ 1.38
NEK3-202ENST00000550841 CCDC65Q8IXS2 484 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 MYCT1Q8N699 235 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 SLC17A8Q8NDX2 589 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 ENGASEQ8NFI3 743 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 SPIRE2Q8WWL2 714 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 PAGE5Q96GU1 130 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 TIGD1Q96MW7 591 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 IFIH1Q9BYX4 1025 aaKnown RBP23.69■■□□□ 1.38
NEK3-202ENST00000550841 ZHX3Q9H4I2 956 aa23.69■■□□□ 1.38
NEK3-202ENST00000550841 HOOK1Q9UJC3 728 aaKnown RBP23.69■■□□□ 1.38
NEK3-202ENST00000550841 NOC2LQ9Y3T9 749 aaKnown RBP23.69■■□□□ 1.38
NEK3-202ENST00000550841 TANC1Q9C0D5 1861 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms