RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 ORC2Q13416 577 aaPredicted RBP26.98■■□□□ 1.91
USP44-205ENST00000549639 CAMK1Q14012 370 aa26.98■■□□□ 1.91
USP44-205ENST00000549639 POF1BQ8WVV4 589 aa26.98■■□□□ 1.91
USP44-205ENST00000549639 PSPC1Q8WXF1 523 aaKnown RBP26.98■■□□□ 1.91
USP44-205ENST00000549639 KIF2CQ99661 725 aa26.98■■□□□ 1.91
USP44-205ENST00000549639 FAM50BQ9Y247 325 aa26.98■■□□□ 1.91
USP44-205ENST00000549639 COL4A3BPQ9Y5P4 624 aa26.98■■□□□ 1.91
USP44-205ENST00000549639 ASAP2O43150 1006 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 FOSBP53539 338 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 CTC1Q2NKJ3 1217 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 TPH2Q8IWU9 490 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 LRRC43Q8N309 656 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.97■■□□□ 1.91
USP44-205ENST00000549639 NECAB3Q96P71 396 aaPredicted RBP26.97■■□□□ 1.91
USP44-205ENST00000549639 CASD1Q96PB1 797 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 MTMR9Q96QG7 549 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 HSD17B14Q9BPX1 270 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 EIF2AK1Q9BQI3 630 aaKnown RBP26.97■■□□□ 1.91
USP44-205ENST00000549639 FOXP1Q9H334 677 aaPredicted RBP26.97■■□□□ 1.91
USP44-205ENST00000549639 CLDND1Q9NY35 253 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 MYO7AQ13402 2215 aa26.97■■□□□ 1.91
USP44-205ENST00000549639 FGFR4P22455 802 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 TXKP42681 527 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 CYP4A11Q02928 519 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 CTTNQ14247 550 aaKnown RBP26.96■■□□□ 1.91
USP44-205ENST00000549639 XKR9Q5GH70 373 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 PTCRAQ6ISU1 281 aaPredicted RBP26.96■■□□□ 1.91
USP44-205ENST00000549639 SRGAP1Q7Z6B7 1085 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 ZNF598Q86UK7 904 aaKnown RBP26.96■■□□□ 1.91
USP44-205ENST00000549639 FAM184AQ8NB25 1140 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 COLGALT1Q8NBJ5 622 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 NLRP4Q96MN2 994 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 CWH43Q9H720 699 aa26.96■■□□□ 1.91
USP44-205ENST00000549639 CSDE1O75534 798 aaKnown RBP26.95■■□□□ 1.9
USP44-205ENST00000549639 DNAJB1P25685 340 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 RAB27AP51159 221 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 HYAL1Q12794 435 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 EMC2Q15006 297 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 PDE12Q6L8Q7 609 aaKnown RBP26.95■■□□□ 1.9
USP44-205ENST00000549639 CATSPER4Q7RTX7 472 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 THNSL1Q8IYQ7 743 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 ZNF579Q8NAF0 562 aaKnown RBP26.95■■□□□ 1.9
USP44-205ENST00000549639 FBXO18Q8NFZ0 1043 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 PRPF31Q8WWY3 499 aaKnown RBP26.95■■□□□ 1.9
USP44-205ENST00000549639 MRPL9Q9BYD2 267 aaKnown RBP26.95■■□□□ 1.9
USP44-205ENST00000549639 IFT122Q9HBG6 1241 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 ANKEF1Q9NU02 776 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 RNF19AQ9NV58 838 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 LZTS1Q9Y250 596 aa26.95■■□□□ 1.9
USP44-205ENST00000549639 FSD2A1L4K1 749 aa26.94■■□□□ 1.9
USP44-205ENST00000549639 GRXCR2A6NFK2 248 aa26.94■■□□□ 1.9
USP44-205ENST00000549639 FGF18O76093 207 aa26.94■■□□□ 1.9
USP44-205ENST00000549639 XRCC6P12956 609 aaKnown RBP eCLIP26.94■■□□□ 1.9
USP44-205ENST00000549639 PPM1AP35813 382 aa26.94■■□□□ 1.9
USP44-205ENST00000549639 TWF2Q6IBS0 349 aaKnown RBP26.94■■□□□ 1.9
USP44-205ENST00000549639 EP400NLQ6ZTU2 488 aa26.94■■□□□ 1.9
USP44-205ENST00000549639 KSR1Q8IVT5 923 aa26.94■■□□□ 1.9
USP44-205ENST00000549639 MTRQ99707 1265 aa26.94■■□□□ 1.9
USP44-205ENST00000549639 PIN4Q9Y237 131 aaKnown RBP26.94■■□□□ 1.9
USP44-205ENST00000549639 ATG2AQ2TAZ0 1938 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 CARNS1A5YM72 827 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 PHKA2P46019 1235 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 PLCB3Q01970 1234 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 GUCY1B3Q02153 619 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 LAMTOR4Q0VGL1 99 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 MXD4Q14582 209 aaPredicted RBP26.93■■□□□ 1.9
USP44-205ENST00000549639 RABEP1Q15276 862 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 PCBP1Q15365 356 aaKnown RBP eCLIP26.93■■□□□ 1.9
USP44-205ENST00000549639 RNF169Q8NCN4 708 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 TMEM143Q96AN5 459 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 TLR9Q9NR96 1032 aa26.93■■□□□ 1.9
USP44-205ENST00000549639 PUF60Q9UHX1 559 aaKnown RBP26.93■■□□□ 1.9
USP44-205ENST00000549639 H3BQ06 376 aaPredicted RBP26.92■■□□□ 1.9
USP44-205ENST00000549639 ZNF623O75123 536 aa26.92■■□□□ 1.9
USP44-205ENST00000549639 DGAT1O75907 488 aa26.92■■□□□ 1.9
USP44-205ENST00000549639 MCM7P33993 719 aa26.92■■□□□ 1.9
USP44-205ENST00000549639 CLLU1OSQ5K130 101 aa26.92■■□□□ 1.9
USP44-205ENST00000549639 FERMT3Q86UX7 667 aa26.92■■□□□ 1.9
USP44-205ENST00000549639 CCDC43Q96MW1 224 aaKnown RBP26.92■■□□□ 1.9
USP44-205ENST00000549639 ZNF558Q96NG5 402 aa26.92■■□□□ 1.9
USP44-205ENST00000549639 UPF2Q9HAU5 1272 aaKnown RBP26.92■■□□□ 1.9
USP44-205ENST00000549639 WNT7AO00755 349 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 ST18O60284 1047 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 ATF7P17544 494 aaPredicted RBP26.91■■□□□ 1.9
USP44-205ENST00000549639 LTBRP36941 435 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 TRAPPC10P48553 1259 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 ADAM15Q13444 863 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 GNL2Q13823 731 aaKnown RBP26.91■■□□□ 1.9
USP44-205ENST00000549639 KCNT2Q6UVM3 1135 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 LRRC55Q6ZSA7 311 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 FAM178BQ8IXR5 827 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 AGPAT5Q9NUQ2 364 aa26.91■■□□□ 1.9
USP44-205ENST00000549639 ZBTB39O15060 712 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 SRGAP2CP0DJJ0 459 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 ATP2B1P20020 1258 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 IRS1P35568 1242 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 KRT17Q04695 432 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 POU5F1BQ06416 359 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 NOSTRINQ8IVI9 506 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 EFHBQ8N7U6 833 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms