RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 NECAB3Q96P71 396 aaPredicted RBP20.85■□□□□ 0.93
CHMP1A-207ENST00000549328 EIF2AK1Q9BQI3 630 aaKnown RBP20.85■□□□□ 0.93
CHMP1A-207ENST00000549328 TYW1Q9NV66 732 aaKnown RBP20.85■□□□□ 0.93
CHMP1A-207ENST00000549328 KIAA1671Q9BY89 1806 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 WNT7AO00755 349 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 CSDE1O75534 798 aaKnown RBP20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 TXKP42681 527 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 CYP4A11Q02928 519 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 CTTNQ14247 550 aaKnown RBP20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 CTC1Q2NKJ3 1217 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 ZNF598Q86UK7 904 aaKnown RBP20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 TPH2Q8IWU9 490 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 ABI1Q8IZP0 508 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 FBXO18Q8NFZ0 1043 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 TCP11Q8WWU5 503 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 PSPC1Q8WXF1 523 aaKnown RBP20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 PPP2R3CQ969Q6 453 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 CASD1Q96PB1 797 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 FOXP1Q9H334 677 aaPredicted RBP20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 IFT122Q9HBG6 1241 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 RNF19AQ9NV58 838 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 COL4A3BPQ9Y5P4 624 aa20.84■□□□□ 0.93
CHMP1A-207ENST00000549328 ASAP2O43150 1006 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 LAG3P18627 525 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 DNAJB1P25685 340 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 GUCY1B3Q02153 619 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 HYAL1Q12794 435 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 ORC2Q13416 577 aaPredicted RBP20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 XKR9Q5GH70 373 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 KSR1Q8IVT5 923 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 POF1BQ8WVV4 589 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 PRPF31Q8WWY3 499 aaKnown RBP20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 RSPH1Q8WYR4 309 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 NLRP4Q96MN2 994 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 CWH43Q9H720 699 aa20.83■□□□□ 0.93
CHMP1A-207ENST00000549328 ZBTB39O15060 712 aa20.82■□□□□ 0.92
CHMP1A-207ENST00000549328 SKIP12755 728 aa20.82■□□□□ 0.92
CHMP1A-207ENST00000549328 SRGAP1Q7Z6B7 1085 aa20.82■□□□□ 0.92
CHMP1A-207ENST00000549328 LRRC43Q8N309 656 aa20.82■□□□□ 0.92
CHMP1A-207ENST00000549328 FAM184AQ8NB25 1140 aa20.82■□□□□ 0.92
CHMP1A-207ENST00000549328 COLGALT1Q8NBJ5 622 aa20.82■□□□□ 0.92
CHMP1A-207ENST00000549328 ANKEF1Q9NU02 776 aa20.82■□□□□ 0.92
CHMP1A-207ENST00000549328 CLDND1Q9NY35 253 aa20.82■□□□□ 0.92
CHMP1A-207ENST00000549328 GRXCR2A6NFK2 248 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 FGF18O76093 207 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 XRCC6P12956 609 aaKnown RBP eCLIP20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 ATF7P17544 494 aaPredicted RBP20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 MCM7P33993 719 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 PHKA2P46019 1235 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 LAMTOR4Q0VGL1 99 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 EMC2Q15006 297 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 RABEP1Q15276 862 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 PTCRAQ6ISU1 281 aaPredicted RBP20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 CATSPER4Q7RTX7 472 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 TMEM143Q96AN5 459 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 TMEM60Q9H2L4 133 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 LZTS1Q9Y250 596 aa20.81■□□□□ 0.92
CHMP1A-207ENST00000549328 ATG2AQ2TAZ0 1938 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 H3BQ06 376 aaPredicted RBP20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 ZNF623O75123 536 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 ATP2B1P20020 1258 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 LTBRP36941 435 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 RAB27AP51159 221 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 PLCB3Q01970 1234 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 MXD4Q14582 209 aaPredicted RBP20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 CLLU1OSQ5K130 101 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 TWF2Q6IBS0 349 aaKnown RBP20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 PDE12Q6L8Q7 609 aaKnown RBP20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 LRRC55Q6ZSA7 311 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 EP400NLQ6ZTU2 488 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 FERMT3Q86UX7 667 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 THNSL1Q8IYQ7 743 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 RNF169Q8NCN4 708 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 MTRQ99707 1265 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 HCSTQ9UBK5 93 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 PIN4Q9Y237 131 aaKnown RBP20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 FAM50BQ9Y247 325 aa20.8■□□□□ 0.92
CHMP1A-207ENST00000549328 DGAT1O75907 488 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 SRGAP2CP0DJJ0 459 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 IRS1P35568 1242 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 PPM1AP35813 382 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 TRAPPC10P48553 1259 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 ADAM15Q13444 863 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 PCBP1Q15365 356 aaKnown RBP eCLIP20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 KCNT2Q6UVM3 1135 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 NOSTRINQ8IVI9 506 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 FAM178BQ8IXR5 827 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 ZNF558Q96NG5 402 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 MRPL9Q9BYD2 267 aaKnown RBP20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 TLR9Q9NR96 1032 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 AGPAT5Q9NUQ2 364 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 FAM105AQ9NUU6 356 aa20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 PUF60Q9UHX1 559 aaKnown RBP20.79■□□□□ 0.92
CHMP1A-207ENST00000549328 ST18O60284 1047 aa20.78■□□□□ 0.92
CHMP1A-207ENST00000549328 POU5F1BQ06416 359 aa20.78■□□□□ 0.92
CHMP1A-207ENST00000549328 RNF149Q8NC42 400 aa20.78■□□□□ 0.92
CHMP1A-207ENST00000549328 MICAL1Q8TDZ2 1067 aa20.78■□□□□ 0.92
CHMP1A-207ENST00000549328 IGFLR1Q9H665 355 aa20.78■□□□□ 0.92
CHMP1A-207ENST00000549328 UPF2Q9HAU5 1272 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms