RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PHF20L1A8MW92 1017 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 MIF4GDA9UHW6 222 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 KIAA0391O15091 583 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 MSH4O15457 936 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ASAP2O43150 1006 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 FAM13AO94988 1023 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 VCAM1P19320 739 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 TNFAIP3P21580 790 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 MMP13P45452 471 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 PRPF4BQ13523 1007 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 KIF22Q14807 665 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 SPRED3Q2MJR0 410 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 SLFN13Q68D06 897 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 DENND2CQ68D51 928 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 JAMLQ86YT9 394 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 RHOT2Q8IXI1 618 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 CCDC197Q8NCU1 140 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ZNF317Q96PQ6 595 aaPredicted RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 EIF2AK1Q9BQI3 630 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 TMEM109Q9BVC6 243 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 TRIM31Q9BZY9 425 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 COA1Q9GZY4 146 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ERVK-5Q9HDB9 667 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 PARP2Q9UGN5 583 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 PNMA2Q9UL42 364 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 PFASO15067 1338 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 PODXLO00592 558 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 CTNND1O60716 968 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 PHF2O75151 1096 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 AGTP01019 485 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 CYP3A4P08684 503 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 EEF2P13639 858 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ABCB4P21439 1286 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 HOXA10P31260 410 aaPredicted RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 CHRNA3P32297 505 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 CYP4A11Q02928 519 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ITIH4Q14624 930 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 C6orf118Q5T5N4 469 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 C11orf63Q6NUN7 778 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ZDHHC24Q6UX98 284 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 BTNL9Q6UXG8 535 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 STXBP4Q6ZWJ1 553 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 COL23A1Q86Y22 540 aaPredicted RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ANKS4BQ8N8V4 417 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 MDM1Q8TC05 714 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ATXN2LQ8WWM7 1075 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 HVCN1Q96D96 273 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 ARHGEF26Q96DR7 871 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 INTS2Q9H0H0 1204 aaKnown RBP10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 THAP2Q9H0W7 228 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 CXorf56Q9H5V9 222 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 CCDC134Q9H6E4 229 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 LRRC4CQ9HCJ2 640 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 TUFT1Q9NNX1 390 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 DMAC2Q9NW81 257 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 SEL1LQ9UBV2 794 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 PCYOX1Q9UHG3 505 aa10.69□□□□□ -0.7
SMARCD1-205ENST00000548573 LRRC37AA6NMS7 1700 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 LY75O60449 1722 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 CCT8L1PA6NM43 557 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 PPIP5K2O43314 1243 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 GGPS1O95749 300 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 SHBGP04278 402 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 GSTA1P08263 222 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 CHN1P15882 459 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 PTGIRP43119 386 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 PLTPP55058 493 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 ADCY2Q08462 1091 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 NEDD9Q14511 834 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 NBPF9Q3BBW0 867 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 CDC42EP5Q6NZY7 148 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 HHIPL2Q6UWX4 724 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 C1orf186Q6ZWK4 172 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 HS2ST1Q7LGA3 356 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 PIGWQ7Z7B1 504 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 FBXO11Q86XK2 927 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 MYCT1Q8N699 235 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 GPATCH11Q8N954 259 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 VTI1AQ96AJ9 217 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 RNF25Q96BH1 459 aaPredicted RBP10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 CRAMP1Q96RY5 1269 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 HSD17B14Q9BPX1 270 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 ADAM7Q9H2U9 754 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 BCAS3Q9H6U6 928 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 PARVGQ9HBI0 331 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 GOPCQ9HD26 462 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 HAUS2Q9NVX0 235 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 COG5Q9UP83 839 aa10.68□□□□□ -0.7
SMARCD1-205ENST00000548573 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 EML1O00423 815 aa10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 BACH1O14867 736 aa10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 C21orf2O43822 256 aa10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 MGRN1O60291 552 aa10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 MMEP08473 750 aa10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 ADRA2BP18089 450 aa10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 MUTP22033 750 aa10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 CTNNA2P26232 953 aa10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 NMT1P30419 496 aaKnown RBP10.67□□□□□ -0.7
SMARCD1-205ENST00000548573 ZNF131P52739 623 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms