RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 HNRNPH3P31942 346 aaKnown RBP14.71□□□□□ -0.05
PTCH1-215ENST00000547672 NAMPTP43490 491 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 EFNA5P52803 228 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 FSTL1Q12841 308 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 MXD4Q14582 209 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-215ENST00000547672 EMC2Q15006 297 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 MTERF2Q49AM1 385 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 E4F1Q66K89 784 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-215ENST00000547672 SLFN12LQ6IEE8 588 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 EEPD1Q7L9B9 569 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 RASAL3Q86YV0 1011 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 TMEM139Q8IV31 216 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 XXYLT1Q8NBI6 393 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 TMEM161BQ8NDZ6 487 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 KIF18AQ8NI77 898 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 ATP8B4Q8TF62 1192 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 FGD4Q96M96 766 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 GPR20Q99678 358 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 LUC7LQ9NQ29 371 aaKnown RBP14.71□□□□□ -0.05
PTCH1-215ENST00000547672 CEP72Q9P209 647 aa14.71□□□□□ -0.05
PTCH1-215ENST00000547672 CLIC2O15247 247 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 SLC16A4O15374 487 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 PPFIA4O75335 1185 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 AKAP3O75969 853 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 CCDC172P0C7W6 258 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 GARTP22102 1010 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 TAF1CQ15572 869 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-215ENST00000547672 TARBP2Q15633 366 aaKnown RBP14.7□□□□□ -0.06
PTCH1-215ENST00000547672 MEA1Q16626 185 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 EXOC3L4Q17RC7 722 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 ZNF484Q5JVG2 852 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 TCERG1LQ5VWI1 586 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 SAPCD2Q86UD0 394 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 MAP4K3Q8IVH8 894 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 DEPTORQ8TB45 409 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 PTPN18Q99952 460 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 TMEM134Q9H6X4 195 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-215ENST00000547672 ERAP1Q9NZ08 941 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 FBXL5Q9UKA1 691 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 PLAGL2Q9UPG8 496 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 PPP2R2CQ9Y2T4 447 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 BZW2Q9Y6E2 419 aaKnown RBP14.7□□□□□ -0.06
PTCH1-215ENST00000547672 WDR81Q562E7 1941 aa14.7□□□□□ -0.06
PTCH1-215ENST00000547672 DENND3A2RUS2 1198 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 MAGEB2O15479 319 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 MAFO75444 373 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-215ENST00000547672 LDHAP00338 332 aaKnown RBP14.69□□□□□ -0.06
PTCH1-215ENST00000547672 ALDH1A1P00352 501 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 SLC10A3P09131 477 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 RFX1P22670 979 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 ARL2P36404 184 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 TFDP1Q14186 410 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 TRMT1LQ7Z2T5 733 aaKnown RBP14.69□□□□□ -0.06
PTCH1-215ENST00000547672 ZNF784Q8NCA9 323 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-215ENST00000547672 SMC1BQ8NDV3 1235 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 PPTC7Q8NI37 304 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 PPP1R13BQ96KQ4 1090 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 TINF2Q9BSI4 451 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 TTYH3Q9C0H2 523 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 POLR3FQ9H1D9 316 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-215ENST00000547672 C2orf40Q9H1Z8 148 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 POLD4Q9HCU8 107 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 TRMT1Q9NXH9 659 aaKnown RBP14.69□□□□□ -0.06
PTCH1-215ENST00000547672 ZNF215Q9UL58 517 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-215ENST00000547672 EPN1Q9Y6I3 576 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-215ENST00000547672 TLL2Q9Y6L7 1015 aa14.69□□□□□ -0.06
PTCH1-215ENST00000547672 K7ERI5 159 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 PMM2O15305 246 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 TLR2O60603 784 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 ATP4AP20648 1035 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 CNGA1P29973 690 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 CYP2J2P51589 502 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 KCNA1Q09470 495 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 MAP2K5Q13163 448 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 SPA17Q15506 151 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 DCAF17Q5H9S7 520 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-215ENST00000547672 NYAP1Q6ZVC0 841 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 IFNL1Q8IU54 200 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 FBXO16Q8IX29 292 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-215ENST00000547672 ZNF526Q8TF50 670 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-215ENST00000547672 SOCS4Q8WXH5 440 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 BORCS6Q96GS4 357 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 MAML3Q96JK9 1138 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 CCDC42Q96M95 316 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 BCAS3Q9H6U6 928 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 FAM207AQ9NSI2 230 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-215ENST00000547672 ZMYM2Q9UBW7 1377 aa14.68□□□□□ -0.06
PTCH1-215ENST00000547672 UTRNP46939 3433 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 ANXA13P27216 316 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 GTF2H1P32780 548 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 MCCD1P59942 119 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-215ENST00000547672 CDC42EP1Q00587 391 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 BFSP1Q12934 665 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 ACVR2BQ13705 512 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 PTPN21Q16825 1174 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 SLC9C1Q4G0N8 1177 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 DUSP28Q4G0W2 176 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 SFMBT2Q5VUG0 894 aa14.67□□□□□ -0.06
PTCH1-215ENST00000547672 TAPT1Q6NXT6 567 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms