RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 TNFAIP3P21580 790 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 DNA2P51530 1060 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 GUCY2FP51841 1108 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 DRG2P55039 364 aaKnown RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 PTENP60484 403 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 TTC31Q49AM3 519 aaPredicted RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 ODR4Q5SWX8 454 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 FKBP1CQ5VVH2 108 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 C11orf63Q6NUN7 778 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 ARMC9Q7Z3E5 817 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 ZNF577Q9BSK1 485 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 ST6GALNAC4Q9H4F1 302 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 LARSQ9P2J5 1176 aaKnown RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 FEM1BQ9UK73 627 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 ZNF536O15090 1300 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 SYNGAP1Q96PV0 1343 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 ZSCAN5CA6NGD5 496 aaPredicted RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 TRIM66O15016 1216 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 TBC1D12O60347 775 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 CFBP00751 764 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 MMP10P09238 476 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 NMT1P30419 496 aaKnown RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 LSP1P33241 339 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 HSD17B3P37058 310 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 MDH1P40925 334 aaKnown RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 ITGB3BPQ13352 177 aaPredicted RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 COL23A1Q86Y22 540 aaPredicted RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 PIGOQ8TEQ8 1089 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 MAP3K20Q9NYL2 800 aaKnown RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 AJAP1Q9UKB5 411 aaPredicted RBP15.85■□□□□ 0.13
LETMD1-209ENST00000547318 PNMA2Q9UL42 364 aa15.85■□□□□ 0.13
LETMD1-209ENST00000547318 A0A1W2PRG0 241 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 MRPS25P82663 173 aaKnown RBP15.84■□□□□ 0.13
LETMD1-209ENST00000547318 GHRHRQ02643 423 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 CEP85LQ5SZL2 805 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 OLIG1Q8TAK6 271 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 CYP2W1Q8TAV3 490 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 SLC35G2Q8TBE7 412 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 FAM151AQ8WW52 585 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 HINFPQ9BQA5 517 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 TDRD3Q9H7E2 651 aaKnown RBP15.84■□□□□ 0.13
LETMD1-209ENST00000547318 VCPKMTQ9H867 229 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 RASAL2Q9UJF2 1139 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 FAM169AQ9Y6X4 670 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 BRWD3Q6RI45 1802 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 H0YGN5 161 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 EXOC3O60645 756 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 LYPLA2O95372 231 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 CTNNA1P35221 906 aaKnown RBP15.84■□□□□ 0.13
LETMD1-209ENST00000547318 SNAP25P60880 206 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 ENPEPQ07075 957 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 PLS1Q14651 629 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 SHROOM1Q2M3G4 852 aaPredicted RBP15.84■□□□□ 0.13
LETMD1-209ENST00000547318 SYCP3Q8IZU3 236 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 ACCSQ96QU6 501 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 UIMC1Q96RL1 719 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 MXRA8Q9BRK3 442 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 PARP2Q9UGN5 583 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 NFS1Q9Y697 457 aa15.84■□□□□ 0.13
LETMD1-209ENST00000547318 DDX3YO15523 660 aaKnown RBP15.83■□□□□ 0.12
LETMD1-209ENST00000547318 BUB1BO60566 1050 aaPredicted RBP15.83■□□□□ 0.12
LETMD1-209ENST00000547318 MTA2O94776 668 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 KIAA0754O94854 1291 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 P4HBP07237 508 aaKnown RBP15.83■□□□□ 0.12
LETMD1-209ENST00000547318 POU5F1Q01860 360 aaKnown RBP15.83■□□□□ 0.12
LETMD1-209ENST00000547318 KCNA1Q09470 495 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 PTGISQ16647 500 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 GLYCTKQ8IVS8 523 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 UBL4BQ8N7F7 174 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 HVCN1Q96D96 273 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 RNPC3Q96LT9 517 aaKnown RBP15.83■□□□□ 0.12
LETMD1-209ENST00000547318 RPS6KC1Q96S38 1066 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 LXNQ9BS40 222 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 GPR88Q9GZN0 384 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 UNC45AQ9H3U1 944 aa15.83■□□□□ 0.12
LETMD1-209ENST00000547318 IPO5O00410 1097 aaKnown RBP15.82■□□□□ 0.12
LETMD1-209ENST00000547318 HSD17B4P51659 736 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 PDCLQ13371 301 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 DRP2Q13474 957 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.82■□□□□ 0.12
LETMD1-209ENST00000547318 TMC3Q7Z5M5 1100 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 AGPAT1Q99943 283 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 DDX47Q9H0S4 455 aaKnown RBP15.82■□□□□ 0.12
LETMD1-209ENST00000547318 CNOT10Q9H9A5 744 aaKnown RBP15.82■□□□□ 0.12
LETMD1-209ENST00000547318 ZBTB21Q9ULJ3 1066 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 PPFIA2O75334 1257 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 FAM107AO95990 144 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 PAEPP09466 180 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 SLURP2P0DP57 97 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 GZMAP12544 262 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 CYP2J2P51589 502 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 RNASE9P60153 205 aaKnown RBP15.82■□□□□ 0.12
LETMD1-209ENST00000547318 CBWD6Q4V339 395 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 ZC2HC1CQ53FD0 456 aaPredicted RBP15.82■□□□□ 0.12
LETMD1-209ENST00000547318 CBWD3Q5JTY5 395 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 CBWD5Q5RIA9 395 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 HOOK3Q86VS8 718 aa15.82■□□□□ 0.12
LETMD1-209ENST00000547318 MCF2L2Q86YR7 1114 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms