RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 HCFC2Q9Y5Z7 792 aa14.17□□□□□ -0.14
COPS7A-221ENST00000546229 CHMP2AO43633 222 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 GAS7O60861 476 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 EOMESO95936 686 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 TECP42680 631 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 FBXL6Q8N531 539 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 MRPL43Q8N983 215 aaKnown RBP14.16□□□□□ -0.14
COPS7A-221ENST00000546229 MICAL1Q8TDZ2 1067 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 AIFM3Q96NN9 605 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 POMKQ9H5K3 350 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 SPG21Q9NZD8 308 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 VAV3Q9UKW4 847 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 C2orf16Q68DN1 1984 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 DCHS1Q96JQ0 3298 aa14.16□□□□□ -0.14
COPS7A-221ENST00000546229 SLC37A4O43826 429 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 CLASP2O75122 1294 aaKnown RBP14.15□□□□□ -0.14
COPS7A-221ENST00000546229 HOXB8P17481 243 aaPredicted RBP14.15□□□□□ -0.14
COPS7A-221ENST00000546229 TMOD1P28289 359 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 PHKA2P46019 1235 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 BCAR1P56945 870 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 CCT2P78371 535 aaKnown RBP14.15□□□□□ -0.14
COPS7A-221ENST00000546229 TBC1D8BQ0IIM8 1120 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 LLGL2Q6P1M3 1020 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 MOXD1Q6UVY6 613 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 ANO5Q75V66 913 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 PBXIP1Q96AQ6 731 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 SH2D3AQ9BRG2 576 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 TEKT3Q9BXF9 490 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 WRAP73Q9P2S5 460 aaPredicted RBP14.15□□□□□ -0.14
COPS7A-221ENST00000546229 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 SAMM50Q9Y512 469 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 IRAK3Q9Y616 596 aa14.15□□□□□ -0.14
COPS7A-221ENST00000546229 A0A087WZ62 844 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 C2CD4DB7Z1M9 353 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 EML1O00423 815 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 MAFO75444 373 aaPredicted RBP14.14□□□□□ -0.15
COPS7A-221ENST00000546229 PDGFBP01127 241 aaPredicted RBP14.14□□□□□ -0.15
COPS7A-221ENST00000546229 SMC1AQ14683 1233 aaKnown RBP14.14□□□□□ -0.15
COPS7A-221ENST00000546229 XKR3Q5GH77 459 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 LPPQ93052 612 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 FDXACB1Q9BRP7 624 aaPredicted RBP14.14□□□□□ -0.15
COPS7A-221ENST00000546229 APOL5Q9BWW9 433 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 MRPL9Q9BYD2 267 aaKnown RBP14.14□□□□□ -0.15
COPS7A-221ENST00000546229 IFT122Q9HBG6 1241 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 KCNMB3Q9NPA1 279 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 CHST12Q9NRB3 414 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 NRBP2Q9NSY0 501 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 TBC1D13Q9NVG8 400 aa14.14□□□□□ -0.15
COPS7A-221ENST00000546229 SEPT9Q9UHD8 586 aaPredicted RBP14.14□□□□□ -0.15
COPS7A-221ENST00000546229 NT5C1B-RDH14C9J2C7 533 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 ZNF623O75123 536 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 ZSCAN20P17040 1043 aaPredicted RBP14.13□□□□□ -0.15
COPS7A-221ENST00000546229 PTPN5P54829 565 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 FGD1P98174 961 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 MTERF2Q49AM1 385 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 ZNF410Q86VK4 478 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 KSR1Q8IVT5 923 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 ABI1Q8IZP0 508 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 ZNF579Q8NAF0 562 aaKnown RBP14.13□□□□□ -0.15
COPS7A-221ENST00000546229 RNF169Q8NCN4 708 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 SLC22A17Q8WUG5 538 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 NLRP7Q8WX94 980 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 AUTS2Q8WXX7 1259 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 RSPH1Q8WYR4 309 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 CASP10Q92851 521 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 ADAM7Q9H2U9 754 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 SMOC2Q9H3U7 446 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 NRDE2Q9H7Z3 1164 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 TCEAL9Q9UHQ7 104 aa14.13□□□□□ -0.15
COPS7A-221ENST00000546229 PUF60Q9UHX1 559 aaKnown RBP14.13□□□□□ -0.15
COPS7A-221ENST00000546229 ZFHX2Q9C0A1 2572 aaPredicted RBP14.12□□□□□ -0.15
COPS7A-221ENST00000546229 MYO10Q9HD67 2058 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 BRD1O95696 1058 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 EFEMP2O95967 443 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 EPCAMP16422 314 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 SP100P23497 879 aaPredicted RBP14.12□□□□□ -0.15
COPS7A-221ENST00000546229 AFF1P51825 1210 aaKnown RBP14.12□□□□□ -0.15
COPS7A-221ENST00000546229 SPIRE1Q08AE8 756 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 PPP2R5CQ13362 524 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 UBXN11Q5T124 520 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 PLA2G4FQ68DD2 849 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 KIAA1841Q6NSI8 718 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 KANK3Q6NY19 840 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 AGMOQ6ZNB7 445 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 TMC7Q7Z402 723 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 BLIDQ8IZY5 108 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 FAM177A1Q8N128 213 aaPredicted RBP14.12□□□□□ -0.15
COPS7A-221ENST00000546229 IGSF21Q96ID5 467 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
COPS7A-221ENST00000546229 MINDY3Q9H8M7 445 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 AGPAT5Q9NUQ2 364 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 FAM105AQ9NUU6 356 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 DACT1Q9NYF0 836 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 DNAJB4Q9UDY4 337 aa14.12□□□□□ -0.15
COPS7A-221ENST00000546229 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
COPS7A-221ENST00000546229 LILRB3O75022 631 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms