RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SMCO2A6NFE2 343 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 DDX39AO00148 427 aaKnown RBP16.69■□□□□ 0.26
RTN3-214ENST00000545432 LMNAP02545 664 aaKnown RBP16.69■□□□□ 0.26
RTN3-214ENST00000545432 GALTP07902 379 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 TMOD1P28289 359 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 METAP2P50579 478 aaKnown RBP eCLIP16.69■□□□□ 0.26
RTN3-214ENST00000545432 ADCY7P51828 1080 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 NAPAP54920 295 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 CMASQ8NFW8 434 aaPredicted RBP16.69■□□□□ 0.26
RTN3-214ENST00000545432 BCL7CQ8WUZ0 217 aaPredicted RBP16.69■□□□□ 0.26
RTN3-214ENST00000545432 AUTS2Q8WXX7 1259 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 FAM167AQ96KS9 214 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 MAP7D2Q96T17 732 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 VN1R3Q9BXE9 311 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 NRDE2Q9H7Z3 1164 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 SFXN1Q9H9B4 322 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 DENND4AQ7Z401 1863 aa16.69■□□□□ 0.26
RTN3-214ENST00000545432 MED19A0JLT2 244 aaPredicted RBP16.68■□□□□ 0.26
RTN3-214ENST00000545432 ZNF862O60290 1169 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 ZNF623O75123 536 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 PSAPP07602 524 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 PHKA2P46019 1235 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 CLCN4P51793 760 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 TARBP2Q15633 366 aaKnown RBP16.68■□□□□ 0.26
RTN3-214ENST00000545432 PTPN14Q15678 1187 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 TMC5Q6UXY8 1006 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 CYP26C1Q6V0L0 522 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 CCDC149Q6ZUS6 474 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 CABP7Q86V35 215 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 KLHL5Q96PQ7 755 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 STK39Q9UEW8 545 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 AKT3Q9Y243 479 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 TPRP12270 2363 aaKnown RBP16.68■□□□□ 0.26
RTN3-214ENST00000545432 CACNA1BQ00975 2339 aa16.68■□□□□ 0.26
RTN3-214ENST00000545432 KRBA1A5PL33 1030 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 N4BP1O75113 896 aaKnown RBP16.67■□□□□ 0.26
RTN3-214ENST00000545432 CIITAP33076 1130 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 ZNF76P36508 570 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 CDC42EP1Q00587 391 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 SIX5Q8N196 739 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 CEP89Q96ST8 783 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 ZNF577Q9BSK1 485 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
RTN3-214ENST00000545432 DLL3Q9NYJ7 618 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 DLGAP2Q9P1A6 1054 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
RTN3-214ENST00000545432 GPR179Q6PRD1 2367 aa16.67■□□□□ 0.26
RTN3-214ENST00000545432 IGKV6-21A0A0C4DH24 114 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 OFD1O75665 1012 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 SETQ01105 290 aaPredicted RBP16.66■□□□□ 0.26
RTN3-214ENST00000545432 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 APOA5Q6Q788 366 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 LRRC71Q8N4P6 559 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 RNF169Q8NCN4 708 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 NXPE3Q969Y0 559 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 LENG9Q96B70 501 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 LSG1Q9H089 658 aaKnown RBP16.66■□□□□ 0.26
RTN3-214ENST00000545432 NRBP2Q9NSY0 501 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 FAM217BQ9NTX9 383 aaPredicted RBP16.66■□□□□ 0.26
RTN3-214ENST00000545432 TBC1D13Q9NVG8 400 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 EPS15L1Q9UBC2 864 aa16.66■□□□□ 0.26
RTN3-214ENST00000545432 ESYT2A0FGR8 921 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 SLC27A2O14975 620 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 EDIL3O43854 480 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 EFEMP2O95967 443 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 C1RP00736 705 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 SKIP12755 728 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 FGFR4P22455 802 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 PUM1Q14671 1186 aaKnown RBP eCLIP16.65■□□□□ 0.26
RTN3-214ENST00000545432 NOMO2Q5JPE7 1267 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 PHLDB3Q6NSJ2 640 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 MICU3Q86XE3 530 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 EPG5Q9HCE0 2579 aa16.65■□□□□ 0.26
RTN3-214ENST00000545432 NARSO43776 548 aaKnown RBP16.64■□□□□ 0.25
RTN3-214ENST00000545432 ZC3H11AO75152 810 aaKnown RBP eCLIP16.64■□□□□ 0.252e-7■■■■■ 30.4
RTN3-214ENST00000545432 OATP04181 439 aa16.64■□□□□ 0.25
RTN3-214ENST00000545432 CNPP09543 421 aaKnown RBP16.64■□□□□ 0.25
RTN3-214ENST00000545432 SLC11A1P49279 550 aa16.64■□□□□ 0.25
RTN3-214ENST00000545432 DGLUCYQ7Z3D6 616 aa16.64■□□□□ 0.25
RTN3-214ENST00000545432 SLC44A3Q8N4M1 653 aa16.64■□□□□ 0.25
RTN3-214ENST00000545432 BORCS6Q96GS4 357 aa16.64■□□□□ 0.25
RTN3-214ENST00000545432 EMILIN2Q9BXX0 1053 aa16.64■□□□□ 0.25
RTN3-214ENST00000545432 ZMYND12Q9H0C1 365 aa16.64■□□□□ 0.25
RTN3-214ENST00000545432 WDR6Q9NNW5 1121 aaKnown RBP16.64■□□□□ 0.25
RTN3-214ENST00000545432 FBXL21Q9UKT6 434 aa16.64■□□□□ 0.25
RTN3-214ENST00000545432 MYH9P35579 1960 aaKnown RBP16.64■□□□□ 0.25
RTN3-214ENST00000545432 WDR64B1ANS9 1081 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 ADAMTS3O15072 1205 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 B4GALT3O60512 393 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 STBD1O95210 358 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
RTN3-214ENST00000545432 TBC1D8BQ0IIM8 1120 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 JAKMIP3Q5VZ66 844 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 GLB1LQ6UWU2 654 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 TMEM87AQ8NBN3 555 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms