RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 HSF5Q4G112 596 aaPredicted RBP4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 ANO6Q4KMQ2 910 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 CCDC174Q6PII3 467 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 LDHAL6AQ6ZMR3 332 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 SPOCD1Q6ZMY3 1216 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 GPR155Q7Z3F1 870 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 DPP9Q86TI2 863 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 NME9Q86XW9 330 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 C7orf31Q8N865 590 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 BHLHE22Q8NFJ8 381 aaPredicted RBP4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 LRTOMTQ8WZ04 291 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 TRIM63Q969Q1 353 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 MPP4Q96JB8 637 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 CGRRF1Q99675 332 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 LRFN3Q9BTN0 628 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 INO80BQ9C086 356 aaPredicted RBP4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 SEMA4AQ9H3S1 761 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 DMRT3Q9NQL9 472 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 PDLIM7Q9NR12 457 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 FAM53CQ9NYF3 392 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 GPRC5BQ9NZH0 403 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 GULP1Q9UBP9 304 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 FANCD2Q9BXW9 1451 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 C22orf46C9J442 243 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 KRIT1O00522 736 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 TLR5O60602 858 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 LTKP29376 864 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 SDHAP31040 664 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 GJA4P35212 333 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 PPM1AP35813 382 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 IL6STP40189 918 aaPredicted RBP4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 PIK3CBP42338 1070 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 AGFG1P52594 562 aaKnown RBP4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 PUM3Q15397 648 aaKnown RBP4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 PITRM1Q5JRX3 1037 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 DGKKQ5KSL6 1271 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 ZBTB41Q5SVQ8 909 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 CATSPEREQ5SY80 951 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 L1TD1Q5T7N2 865 aaKnown RBP4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 JAKMIP3Q5VZ66 844 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 ZPBP2Q6X784 338 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 DAAM2Q86T65 1068 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 ZSWIM9Q86XI8 627 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 PHYKPLQ8IUZ5 450 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 CLASRPQ8N2M8 674 aaKnown RBP4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 PPHLN1Q8NEY8 458 aaKnown RBP4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 UHMK1Q8TAS1 419 aaKnown RBP4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 ASB11Q8WXH4 323 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 FERMT2Q96AC1 680 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 FAM84AQ96KN4 292 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 WNT8AQ9H1J5 351 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 KCTD10Q9H3F6 313 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 CERS4Q9HA82 394 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 SLC6A20Q9NP91 592 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 ERVK13-1Q9NX77 482 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 PGAP2Q9UHJ9 254 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 DUSP13Q9UII6 198 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 X6R8D5 127 aa4.75□□□□□ -1.65
SFSWAP-211ENST00000542813 TMEM82A0PJX8 343 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 PRSS38A1L453 326 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 CFAP69A5D8W1 941 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 CCDC154A6NI56 674 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 LRRC10BA6NIK2 292 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 RHPN2P1A8MT19 583 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 WASH4PA8MWX3 477 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 KPNA5O15131 536 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 BUB1BO60566 1050 aaPredicted RBP4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 LDHCP07864 332 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 ABCB4P21439 1286 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 TNFSF4P23510 183 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 CASP2P42575 452 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 IL12RB1P42701 662 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 CASP5P51878 434 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 BCAR1P56945 870 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 MESP2Q0VG99 397 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 DUSP4Q13115 394 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 POLD3Q15054 466 aaPredicted RBP4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 PRR16Q569H4 304 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 CDKAL1Q5VV42 579 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 HLA-DQA1Q5Y7H0 255 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 SWSAP1Q6NVH7 229 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 TLDC1Q6P9B6 456 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 LVRNQ6Q4G3 990 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 KCTD1Q719H9 257 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 MYCT1Q8N699 235 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 MARCH10Q8NA82 808 aaPredicted RBP4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 KIAA1191Q96A73 305 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 MAML3Q96JK9 1138 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 FCRL2Q96LA5 508 aaPredicted RBP4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 ISCA1Q9BUE6 129 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 MYLK2Q9H1R3 596 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 POFUT1Q9H488 388 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 IFT122Q9HBG6 1241 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 AGO4Q9HCK5 861 aaKnown RBP4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 CDC23Q9UJX2 597 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 LIMCH1Q9UPQ0 1083 aa4.74□□□□□ -1.65
SFSWAP-211ENST00000542813 CORO2BQ9UQ03 480 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms