RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 GLIS2Q9BZE0 524 aaPredicted RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 GPR88Q9GZN0 384 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 AGO4Q9HCK5 861 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 KCNH7Q9NS40 1196 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 COL20A1Q9P218 1284 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 LARSQ9P2J5 1176 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 STXBP5LQ9Y2K9 1186 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 ZBTB12Q9Y330 459 aaPredicted RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 PHF20L1A8MW92 1017 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 BHMG1C9JSJ3 638 aaPredicted RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 CCDC188H7C350 402 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 PGRMC1O00264 195 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 KCNK3O14649 394 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 GLI1P08151 1106 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 RXRBP28702 533 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 INPP5BP32019 993 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 NOP2P46087 812 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 RARRES1P49788 294 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 CYP2J2P51589 502 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 MCCD1P59942 119 aaPredicted RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 PPFIA1Q13136 1202 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 KIF22Q14807 665 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 CBWD6Q4V339 395 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 CBWD3Q5JTY5 395 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 CBWD5Q5RIA9 395 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 INTS8Q75QN2 995 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 MIGA2Q7L4E1 593 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 NIM1KQ8IY84 436 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 RASGEF1CQ8N431 466 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 WHAMMQ8TF30 809 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 RFFLQ8WZ73 363 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 HOOK2Q96ED9 719 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 AGBL1Q96MI9 1066 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 GDAP1L1Q96MZ0 367 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 KRT12Q99456 494 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 ZNF341Q9BYN7 854 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 KIAA1683Q9H0B3 1180 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 IKZF4Q9H2S9 585 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 POLD4Q9HCU8 107 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 TBC1D22BQ9NU19 505 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 DNAJC12Q9UKB3 198 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 PACSIN2Q9UNF0 486 aaPredicted RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 UNCXA6NJT0 531 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 K7ENM7 598 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 NFIBO00712 420 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 PMM2O15305 246 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 EXOC3O60645 756 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 SHOX2O60902 331 aaPredicted RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 HSF2BPO75031 334 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 PLS3P13797 630 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 KCNA3P22001 575 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 QARSP47897 775 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 ITGB3BPQ13352 177 aaPredicted RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 DRAP1Q14919 205 aaPredicted RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 TKFCQ3LXA3 575 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 SYCP3Q8IZU3 236 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 SLC17A8Q8NDX2 589 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 FAM76AQ8TAV0 307 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 U2AF1L4Q8WU68 220 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 HES6Q96HZ4 224 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 ACCSQ96QU6 501 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 SLC38A10Q9HBR0 1119 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 TTC7AQ9ULT0 858 aaPredicted RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 USP20Q9Y2K6 914 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 DIS3Q9Y2L1 958 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 ZHX2Q9Y6X8 837 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 GOLGA6CA6NDK9 693 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 WNT10BO00744 389 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 GOLGA6DP0CG33 693 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 TRIM49P0CI25 452 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 TRIM49CP0CI26 452 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 FDX1P10109 184 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 KRT13P13646 458 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 CARSP49589 748 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 GALCP54803 685 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 GUCY2DQ02846 1103 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 CETN1Q12798 172 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 CUL1Q13616 776 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 TCEAL1Q15170 157 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 PEX26Q7Z412 305 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 NT5DC3Q86UY8 548 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 KSR1Q8IVT5 923 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 C4orf19Q8IY42 314 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 TSEN2Q8NCE0 465 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 IL31RAQ8NI17 732 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 LMO3Q8TAP4 145 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 SYTL5Q8TDW5 730 aaPredicted RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 RIN2Q8WYP3 895 aaPredicted RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 IWS1Q96ST2 819 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 EPB41L5Q9HCM4 733 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 GOLGA6AQ9NYA3 693 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 PARP14Q460N5 1801 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 RAD51CO43502 376 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 DNA2P51530 1060 aa7.11□□□□□ -1.27
PTPRO-208ENST00000542557 HADHBP55084 474 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 MRPS9P82933 396 aaKnown RBP7.11□□□□□ -1.27
PTPRO-208ENST00000542557 GTF2BQ00403 316 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms