RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 REPS2Q8NFH8 660 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 SYT11Q9BT88 431 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 APEX2Q9UBZ4 518 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 TFR2Q9UP52 801 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 SSC5DA1L4H1 1573 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 PFASO15067 1338 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 F8VZ95 297 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 K7ENM7 598 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 VWA5AO00534 786 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 SRGAP2O75044 1071 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 TMEM253P0C7T8 217 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 ALAS1P13196 640 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 GTF2H1P32780 548 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 MYL7Q01449 175 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 KIF22Q14807 665 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 ZYXQ15942 572 aaKnown RBP10.74□□□□□ -0.69
SS18-205ENST00000542420 PPP2R5EQ16537 467 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 HSP90B2PQ58FF3 399 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 OTUD6AQ7L8S5 288 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 USP37Q86T82 979 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 CDAN1Q8IWY9 1227 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
SS18-205ENST00000542420 ACTRT1Q8TDG2 376 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 AENQ8WTP8 325 aaKnown RBP10.74□□□□□ -0.69
SS18-205ENST00000542420 COG1Q8WTW3 980 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 TAF4BQ92750 862 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 KIFAP3Q92845 792 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 NTPCRQ9BSD7 190 aaKnown RBP10.74□□□□□ -0.69
SS18-205ENST00000542420 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.74□□□□□ -0.69
SS18-205ENST00000542420 SELENOOQ9BVL4 669 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.74□□□□□ -0.69
SS18-205ENST00000542420 SUCLA2Q9P2R7 463 aaPredicted RBP10.74□□□□□ -0.69
SS18-205ENST00000542420 ADAMTS1Q9UHI8 967 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 SALL4Q9UJQ4 1053 aa10.74□□□□□ -0.69
SS18-205ENST00000542420 ASTN2O75129 1339 aaPredicted RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 KIAA0391O15091 583 aaKnown RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 CLIC2O15247 247 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 PALMO75781 387 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 YWHABP31946 246 aaKnown RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 DSG3P32926 999 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 EPHB4P54760 987 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 RPS6P62753 249 aaKnown RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 VSIG10LQ86VR7 867 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 SYCP3Q8IZU3 236 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 LRRC57Q8N9N7 239 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 XXYLT1Q8NBI6 393 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 ZNF280CQ8ND82 737 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 CAVIN3Q969G5 261 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 CAPZA3Q96KX2 299 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 INPP4AQ96PE3 977 aaPredicted RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 INTS2Q9H0H0 1204 aaKnown RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 RPAP3Q9H6T3 665 aaPredicted RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 TTC7AQ9ULT0 858 aaPredicted RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 CCDC188H7C350 402 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 EXOC3O60645 756 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 ACTN1P12814 892 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 SMTNP53814 917 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 TNNC1P63316 161 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 APBA1Q02410 837 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 ZC2HC1CQ53FD0 456 aaPredicted RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 MUM1L1Q5H9M0 696 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 SH3D19Q5HYK7 790 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 TMC2Q8TDI7 906 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 ATP6V0A1Q93050 837 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 CCDC43Q96MW1 224 aaKnown RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 UIMC1Q96RL1 719 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 RMDN3Q96TC7 470 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 MOV10L1Q9BXT6 1211 aaKnown RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 RAVER2Q9HCJ3 691 aaKnown RBP10.73□□□□□ -0.69
SS18-205ENST00000542420 STIM2Q9P246 746 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 HACL1Q9UJ83 578 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 TMEM59LQ9UK28 342 aa10.73□□□□□ -0.69
SS18-205ENST00000542420 KIF4AO95239 1232 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 UBXN2AP68543 259 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 KCNA1Q09470 495 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 RPS6KA1Q15418 735 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 EPC2Q52LR7 807 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 ARHGEF16Q5VV41 709 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 NFRKBQ6P4R8 1299 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 MAP4K3Q8IVH8 894 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 IFT20Q8IY31 132 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 RASGEF1CQ8N431 466 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 GOLGA6L1Q8N7Z2 621 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 MCPH1Q8NEM0 835 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 IL31RAQ8NI17 732 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 LMO3Q8TAP4 145 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 MORC4Q8TE76 937 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 TAAR1Q96RJ0 339 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 PICK1Q9NRD5 415 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 RNF146Q9NTX7 359 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 DNAJC12Q9UKB3 198 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 PPME1Q9Y570 386 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 PCDHA10Q9Y5I2 948 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 ZNF185O15231 689 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 EVI5O60447 810 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 GMPSP49915 693 aaPredicted RBP10.72□□□□□ -0.69
SS18-205ENST00000542420 VAMP7P51809 220 aa10.72□□□□□ -0.69
SS18-205ENST00000542420 NAP1L1P55209 391 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms